
PFRMAT AL
TARGET T0098
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1taf_A
P  142 P 19
K  143 K 20
D  146 D 21
A  147 A 22
S  148 Q 23
I  149 I 25
T  150 M 26
S  151 S 27
I  152 I 28
I  153 L 29
H  154 K 30
E  155 E 31
I  156 L 32
G  157 N 33
V  158 V 34
P  159 Q 35
A  160 E 36
H  161 Y 37
I  162 E 38
K  163 P 39
G  164 R 40
Y  165 V 41
L  166 V 42
Y  167 N 43
L  168 Q 44
R  169 L 45
E  170 L 46
A  171 E 47
I  172 F 48
A  173 T 49
M  174 F 50
V  175 R 51
Y  176 Y 52
I  179 V 53
E  180 T 54
L  181 S 55
L  182 I 56
G  183 L 57
S  184 D 58
I  185 D 59
T  186 A 60
K  187 K 61
V  188 V 62
Y  190 Y 63
P  191 A 64
D  192 N 65
I  193 H 66
A  194 A 67
K  195 R 68
K  196 K 69
Y  197 K 70
N  198 T 71
T  199 I 72
T  200 D 73
A  201 L 74
S  202 D 75
R  203 D 76
V  204 V 77
E  205 R 78
R  206 L 79
A  207 A 80
I  208 T 81
R  209 E 82
H  210 V 83
A  211 T 84
I  212 L 85
E  213 D 86
TER
END

