
PFRMAT TS
TARGET T0098
AUTHOR 7573-5202-7463
METHOD T0098 FOLD RECOGNITION
METHOD The target profile was searched against database of profiles
METHOD build from 35% NR subset of PDB. Each profile was generated 
METHOD by running 5 iteration of psiblast and dumping scoring 
METHOD matrix. The significance of each alignment was evaluated by 
METHOD randomly shuffling template profile. Top scoring hits 
METHOD (Z-score > 4.0)  were checked for compatability 
METHOD with secondary structure prediction (psipred).  
MODEL 1
PARENT 1vpw_A
ATOM      1  N   SER   151      -2.792 -10.528   0.208  1.00  1.00
ATOM      2  CA  SER   151      -2.272 -10.468   1.584  1.00  1.00
ATOM      3  C   SER   151      -2.500  -9.068   2.200  1.00  1.00
ATOM      4  O   SER   151      -2.788  -8.956   3.404  1.00  1.00
ATOM      5  N   ILE   153      -2.440  -8.020   1.372  1.00  1.00
ATOM      6  CA  ILE   153      -2.752  -6.664   1.860  1.00  1.00
ATOM      7  C   ILE   153      -4.152  -6.744   2.484  1.00  1.00
ATOM      8  O   ILE   153      -4.456  -6.048   3.460  1.00  1.00
ATOM      9  N   HIS   154      -4.984  -7.636   1.912  1.00  1.00
ATOM     10  CA  HIS   154      -6.340  -7.916   2.380  1.00  1.00
ATOM     11  C   HIS   154      -6.264  -8.436   3.784  1.00  1.00
ATOM     12  O   HIS   154      -7.012  -8.012   4.656  1.00  1.00
ATOM     13  N   GLU   155      -5.376  -9.388   4.016  1.00  1.00
ATOM     14  CA  GLU   155      -5.268  -9.916   5.360  1.00  1.00
ATOM     15  C   GLU   155      -4.756  -8.840   6.264  1.00  1.00
ATOM     16  O   GLU   155      -5.100  -8.812   7.444  1.00  1.00
ATOM     17  N   ILE   156      -3.956  -7.924   5.736  1.00  1.00
ATOM     18  CA  ILE   156      -3.472  -6.856   6.616  1.00  1.00
ATOM     19  C   ILE   156      -4.628  -5.940   6.984  1.00  1.00
ATOM     20  O   ILE   156      -4.828  -5.608   8.156  1.00  1.00
ATOM     21  N   GLY   157      -5.400  -5.544   5.980  1.00  1.00
ATOM     22  CA  GLY   157      -6.524  -4.656   6.220  1.00  1.00
ATOM     23  C   GLY   157      -7.436  -5.220   7.304  1.00  1.00
ATOM     24  O   GLY   157      -7.876  -4.496   8.200  1.00  1.00
ATOM     25  N   VAL   158      -7.680  -6.528   7.228  1.00  1.00
ATOM     26  CA  VAL   158      -8.544  -7.236   8.180  1.00  1.00
ATOM     27  C   VAL   158      -8.048  -7.176   9.612  1.00  1.00
ATOM     28  O   VAL   158      -8.800  -6.816  10.520  1.00  1.00
ATOM     29  N   PRO   159      -6.796  -7.560   9.820  1.00  1.00
ATOM     30  CA  PRO   159      -6.232  -7.540  11.156  1.00  1.00
ATOM     31  C   PRO   159      -6.396  -6.128  11.720  1.00  1.00
ATOM     32  O   PRO   159      -6.708  -5.944  12.892  1.00  1.00
ATOM     33  N   ALA   160      -6.220  -5.140  10.844  1.00  1.00
ATOM     34  CA  ALA   160      -6.328  -3.732  11.224  1.00  1.00
ATOM     35  C   ALA   160      -7.744  -3.168  11.184  1.00  1.00
ATOM     36  O   ALA   160      -7.976  -2.032  11.584  1.00  1.00
ATOM     37  N   HIS   161      -8.692  -3.960  10.708  1.00  1.00
ATOM     38  CA  HIS   161     -10.076  -3.516  10.576  1.00  1.00
ATOM     39  C   HIS   161     -10.168  -2.180   9.904  1.00  1.00
ATOM     40  O   HIS   161     -10.660  -1.216  10.492  1.00  1.00
ATOM     41  N   ILE   162      -9.688  -2.128   8.664  1.00  1.00
ATOM     42  CA  ILE   162      -9.752  -0.932   7.836  1.00  1.00
ATOM     43  C   ILE   162      -9.672  -1.448   6.456  1.00  1.00
ATOM     44  O   ILE   162      -9.400  -2.632   6.252  1.00  1.00
ATOM     45  N   TYR   167      -9.884  -0.576   5.488  1.00  1.00
ATOM     46  CA  TYR   167      -9.812  -0.984   4.104  1.00  1.00
ATOM     47  C   TYR   167      -8.372  -1.108   3.620  1.00  1.00
ATOM     48  O   TYR   167      -7.444  -0.424   4.104  1.00  1.00
ATOM     49  N   LEU   168      -8.196  -1.984   2.648  1.00  1.00
ATOM     50  CA  LEU   168      -6.920  -2.176   2.076  1.00  1.00
ATOM     51  C   LEU   168      -6.504  -0.828   1.532  1.00  1.00
ATOM     52  O   LEU   168      -5.356  -0.448   1.664  1.00  1.00
ATOM     53  N   GLU   170      -7.456  -0.104   0.948  1.00  1.00
ATOM     54  CA  GLU   170      -7.184   1.252   0.420  1.00  1.00
ATOM     55  C   GLU   170      -6.444   2.056   1.504  1.00  1.00
ATOM     56  O   GLU   170      -5.416   2.704   1.240  1.00  1.00
ATOM     57  N   ALA   171      -6.960   1.988   2.732  1.00  1.00
ATOM     58  CA  ALA   171      -6.324   2.688   3.824  1.00  1.00
ATOM     59  C   ALA   171      -4.924   2.188   3.904  1.00  1.00
ATOM     60  O   ALA   171      -3.996   2.956   3.724  1.00  1.00
ATOM     61  N   ILE   172      -4.796   0.876   4.144  1.00  1.00
ATOM     62  CA  ILE   172      -3.504   0.204   4.256  1.00  1.00
ATOM     63  C   ILE   172      -2.560   0.696   3.180  1.00  1.00
ATOM     64  O   ILE   172      -1.404   1.048   3.440  1.00  1.00
ATOM     65  N   ALA   173      -3.052   0.744   1.968  1.00  1.00
ATOM     66  CA  ALA   173      -2.192   1.188   0.908  1.00  1.00
ATOM     67  C   ALA   173      -1.736   2.612   1.156  1.00  1.00
ATOM     68  O   ALA   173      -0.572   2.916   1.048  1.00  1.00
ATOM     69  N   MET   174      -2.660   3.484   1.508  1.00  1.00
ATOM     70  CA  MET   174      -2.304   4.864   1.736  1.00  1.00
ATOM     71  C   MET   174      -1.228   5.044   2.780  1.00  1.00
ATOM     72  O   MET   174      -0.352   5.904   2.628  1.00  1.00
ATOM     73  N   VAL   175      -1.276   4.252   3.844  1.00  1.00
ATOM     74  CA  VAL   175      -0.260   4.416   4.868  1.00  1.00
ATOM     75  C   VAL   175       1.040   3.788   4.484  1.00  1.00
ATOM     76  O   VAL   175       2.096   4.208   4.920  1.00  1.00
ATOM     77  N   TYR   176       0.972   2.780   3.648  1.00  1.00
ATOM     78  CA  TYR   176       2.176   2.132   3.212  1.00  1.00
ATOM     79  C   TYR   176       2.888   3.048   2.240  1.00  1.00
ATOM     80  O   TYR   176       4.092   3.052   2.160  1.00  1.00
ATOM     81  N   HIS   177       2.148   3.872   1.524  1.00  1.00
ATOM     82  CA  HIS   177       2.796   4.752   0.596  1.00  1.00
ATOM     83  C   HIS   177       2.684   6.220   0.952  1.00  1.00
ATOM     84  O   HIS   177       3.016   7.076   0.108  1.00  1.00
ATOM     85  N   ASP   178       2.244   6.508   2.188  1.00  1.00
ATOM     86  CA  ASP   178       2.088   7.892   2.672  1.00  1.00
ATOM     87  C   ASP   178       1.520   8.740   1.540  1.00  1.00
ATOM     88  O   ASP   178       2.040   9.776   1.176  1.00  1.00
ATOM     89  N   ILE   179       0.480   8.224   0.936  1.00  1.00
ATOM     90  CA  ILE   179      -0.088   8.832  -0.220  1.00  1.00
ATOM     91  C   ILE   179      -1.356   9.688   0.056  1.00  1.00
ATOM     92  O   ILE   179      -1.956  10.292  -0.844  1.00  1.00
ATOM     93  N   GLU   180      -1.724   9.772   1.316  1.00  1.00
ATOM     94  CA  GLU   180      -2.840  10.592   1.724  1.00  1.00
ATOM     95  C   GLU   180      -2.860  10.528   3.248  1.00  1.00
ATOM     96  O   GLU   180      -2.316   9.580   3.820  1.00  1.00
ATOM     97  N   LEU   181      -3.368  11.564   3.924  1.00  1.00
ATOM     98  CA  LEU   181      -3.360  11.572   5.396  1.00  1.00
ATOM     99  C   LEU   181      -4.140  10.436   6.104  1.00  1.00
ATOM    100  O   LEU   181      -5.284  10.096   5.724  1.00  1.00
ATOM    101  N   LEU   182      -3.552   9.880   7.160  1.00  1.00
ATOM    102  CA  LEU   182      -4.240   8.820   7.896  1.00  1.00
ATOM    103  C   LEU   182      -4.096   9.024   9.364  1.00  1.00
ATOM    104  O   LEU   182      -3.020   9.268   9.840  1.00  1.00
ATOM    105  N   GLY   183      -5.200   8.904  10.080  1.00  1.00
ATOM    106  CA  GLY   183      -5.212   9.056  11.528  1.00  1.00
ATOM    107  C   GLY   183      -4.012   8.328  12.152  1.00  1.00
ATOM    108  O   GLY   183      -3.612   7.272  11.656  1.00  1.00
ATOM    109  N   SER   184      -3.420   8.908  13.204  1.00  1.00
ATOM    110  CA  SER   184      -2.252   8.296  13.848  1.00  1.00
ATOM    111  C   SER   184      -2.612   6.908  14.240  1.00  1.00
ATOM    112  O   SER   184      -2.008   5.940  13.764  1.00  1.00
ATOM    113  N   ILE   185      -3.612   6.828  15.104  1.00  1.00
ATOM    114  CA  ILE   185      -4.160   5.580  15.580  1.00  1.00
ATOM    115  C   ILE   185      -4.180   4.600  14.440  1.00  1.00
ATOM    116  O   ILE   185      -3.504   3.564  14.444  1.00  1.00
ATOM    117  N   THR   186      -4.972   4.972  13.448  1.00  1.00
ATOM    118  CA  THR   186      -5.168   4.176  12.280  1.00  1.00
ATOM    119  C   THR   186      -3.852   3.748  11.680  1.00  1.00
ATOM    120  O   THR   186      -3.564   2.556  11.532  1.00  1.00
ATOM    121  N   LYS   187      -3.032   4.712  11.372  1.00  1.00
ATOM    122  CA  LYS   187      -1.764   4.408  10.804  1.00  1.00
ATOM    123  C   LYS   187      -0.956   3.416  11.660  1.00  1.00
ATOM    124  O   LYS   187      -0.388   2.464  11.144  1.00  1.00
ATOM    125  N   VAL   188      -0.960   3.588  12.964  1.00  1.00
ATOM    126  CA  VAL   188      -0.232   2.656  13.820  1.00  1.00
ATOM    127  C   VAL   188      -0.764   1.272  13.628  1.00  1.00
ATOM    128  O   VAL   188      -0.024   0.352  13.272  1.00  1.00
ATOM    129  N   LEU   189      -2.056   1.132  13.868  1.00  1.00
ATOM    130  CA  LEU   189      -2.732  -0.152  13.732  1.00  1.00
ATOM    131  C   LEU   189      -2.324  -0.888  12.460  1.00  1.00
ATOM    132  O   LEU   189      -2.012  -2.088  12.496  1.00  1.00
ATOM    133  N   TYR   190      -2.304  -0.164  11.344  1.00  1.00
ATOM    134  CA  TYR   190      -1.916  -0.780  10.112  1.00  1.00
ATOM    135  C   TYR   190      -0.520  -1.352  10.272  1.00  1.00
ATOM    136  O   TYR   190      -0.276  -2.516   9.960  1.00  1.00
ATOM    137  N   PRO   191       0.404  -0.532  10.760  1.00  1.00
ATOM    138  CA  PRO   191       1.760  -0.996  10.932  1.00  1.00
ATOM    139  C   PRO   191       1.752  -2.216  11.776  1.00  1.00
ATOM    140  O   PRO   191       2.360  -3.220  11.424  1.00  1.00
ATOM    141  N   ASP   192       1.012  -2.128  12.872  1.00  1.00
ATOM    142  CA  ASP   192       0.860  -3.224  13.812  1.00  1.00
ATOM    143  C   ASP   192       0.624  -4.540  13.076  1.00  1.00
ATOM    144  O   ASP   192       1.404  -5.484  13.180  1.00  1.00
ATOM    145  N   ILE   193      -0.464  -4.584  12.324  1.00  1.00
ATOM    146  CA  ILE   193      -0.776  -5.760  11.572  1.00  1.00
ATOM    147  C   ILE   193       0.380  -6.040  10.648  1.00  1.00
ATOM    148  O   ILE   193       0.912  -7.152  10.664  1.00  1.00
ATOM    149  N   ALA   194       0.756  -5.024   9.856  1.00  1.00
ATOM    150  CA  ALA   194       1.836  -5.140   8.876  1.00  1.00
ATOM    151  C   ALA   194       2.960  -5.896   9.472  1.00  1.00
ATOM    152  O   ALA   194       3.644  -6.656   8.804  1.00  1.00
ATOM    153  N   LYS   195       3.168  -5.684  10.752  1.00  1.00
ATOM    154  CA  LYS   195       4.248  -6.372  11.364  1.00  1.00
ATOM    155  C   LYS   195       4.040  -7.780  11.820  1.00  1.00
ATOM    156  O   LYS   195       4.780  -8.656  11.400  1.00  1.00
ATOM    157  N   LYS   196       3.008  -8.028  12.620  1.00  1.00
ATOM    158  CA  LYS   196       2.764  -9.392  13.056  1.00  1.00
ATOM    159  C   LYS   196       2.580 -10.248  11.828  1.00  1.00
ATOM    160  O   LYS   196       3.276 -11.244  11.624  1.00  1.00
ATOM    161  N   TYR   197       1.676  -9.816  10.972  1.00  1.00
ATOM    162  CA  TYR   197       1.420 -10.540   9.756  1.00  1.00
ATOM    163  C   TYR   197       2.684 -10.728   8.972  1.00  1.00
ATOM    164  O   TYR   197       2.748 -11.568   8.084  1.00  1.00
ATOM    165  N   ASN   198       3.708  -9.956   9.308  1.00  1.00
ATOM    166  CA  ASN   198       4.964 -10.084   8.612  1.00  1.00
ATOM    167  C   ASN   198       4.684  -9.800   7.136  1.00  1.00
ATOM    168  O   ASN   198       4.768 -10.704   6.292  1.00  1.00
ATOM    169  N   THR   199       4.320  -8.552   6.840  1.00  1.00
ATOM    170  CA  THR   199       3.956  -8.152   5.476  1.00  1.00
ATOM    171  C   THR   199       5.056  -7.592   4.552  1.00  1.00
ATOM    172  O   THR   199       5.836  -6.708   4.928  1.00  1.00
ATOM    173  N   THR   200       5.064  -8.088   3.324  1.00  1.00
ATOM    174  CA  THR   200       5.980  -7.608   2.328  1.00  1.00
ATOM    175  C   THR   200       5.132  -7.300   1.132  1.00  1.00
ATOM    176  O   THR   200       4.588  -8.176   0.504  1.00  1.00
ATOM    177  N   ALA   201       4.988  -6.044   0.844  1.00  1.00
ATOM    178  CA  ALA   201       4.164  -5.624  -0.256  1.00  1.00
ATOM    179  C   ALA   201       4.676  -6.280  -1.496  1.00  1.00
ATOM    180  O   ALA   201       5.832  -6.588  -1.572  1.00  1.00
ATOM    181  N   SER   202       3.828  -6.512  -2.480  1.00  1.00
ATOM    182  CA  SER   202       4.296  -7.136  -3.700  1.00  1.00
ATOM    183  C   SER   202       4.580  -6.136  -4.784  1.00  1.00
ATOM    184  O   SER   202       3.688  -5.448  -5.272  1.00  1.00
ATOM    185  N   ARG   203       5.828  -6.084  -5.192  1.00  1.00
ATOM    186  CA  ARG   203       6.212  -5.172  -6.236  1.00  1.00
ATOM    187  C   ARG   203       5.608  -5.628  -7.528  1.00  1.00
ATOM    188  O   ARG   203       5.340  -4.824  -8.420  1.00  1.00
ATOM    189  N   VAL   204       5.424  -6.920  -7.676  1.00  1.00
ATOM    190  CA  VAL   204       4.904  -7.348  -8.940  1.00  1.00
ATOM    191  C   VAL   204       3.480  -6.844  -9.120  1.00  1.00
ATOM    192  O   VAL   204       3.132  -6.268 -10.176  1.00  1.00
ATOM    193  N   GLU   205       2.680  -6.996  -8.064  1.00  1.00
ATOM    194  CA  GLU   205       1.308  -6.508  -8.096  1.00  1.00
ATOM    195  C   GLU   205       1.400  -5.028  -8.368  1.00  1.00
ATOM    196  O   GLU   205       0.824  -4.520  -9.344  1.00  1.00
ATOM    197  N   ARG   206       2.164  -4.324  -7.520  1.00  1.00
ATOM    198  CA  ARG   206       2.324  -2.888  -7.700  1.00  1.00
ATOM    199  C   ARG   206       2.688  -2.500  -9.112  1.00  1.00
ATOM    200  O   ARG   206       2.032  -1.656  -9.728  1.00  1.00
ATOM    201  N   ALA   207       3.732  -3.116  -9.636  1.00  1.00
ATOM    202  CA  ALA   207       4.184  -2.808 -10.976  1.00  1.00
ATOM    203  C   ALA   207       3.076  -2.964 -11.952  1.00  1.00
ATOM    204  O   ALA   207       3.028  -2.240 -12.960  1.00  1.00
ATOM    205  N   ILE   208       2.172  -3.900 -11.644  1.00  1.00
ATOM    206  CA  ILE   208       1.004  -4.212 -12.480  1.00  1.00
ATOM    207  C   ILE   208       0.136  -2.992 -12.700  1.00  1.00
ATOM    208  O   ILE   208      -0.364  -2.756 -13.800  1.00  1.00
ATOM    209  N   ARG   209      -0.016  -2.188 -11.652  1.00  1.00
ATOM    210  CA  ARG   209      -0.836  -0.984 -11.740  1.00  1.00
ATOM    211  C   ARG   209      -0.068   0.284 -12.132  1.00  1.00
ATOM    212  O   ARG   209      -0.416   0.956 -13.100  1.00  1.00
ATOM    213  N   HIS   210       0.972   0.604 -11.368  1.00  1.00
ATOM    214  CA  HIS   210       1.796   1.804 -11.572  1.00  1.00
ATOM    215  C   HIS   210       2.584   1.864 -12.888  1.00  1.00
ATOM    216  O   HIS   210       3.020   2.932 -13.308  1.00  1.00
ATOM    217  N   ALA   211       2.776   0.720 -13.520  1.00  1.00
ATOM    218  CA  ALA   211       3.488   0.644 -14.808  1.00  1.00
ATOM    219  C   ALA   211       4.964   0.996 -14.840  1.00  1.00
ATOM    220  O   ALA   211       5.392   1.884 -15.584  1.00  1.00
ATOM    221  N   ILE   212       5.736   0.268 -14.048  1.00  1.00
ATOM    222  CA  ILE   212       7.164   0.452 -13.980  1.00  1.00
ATOM    223  C   ILE   212       7.648  -0.416 -12.864  1.00  1.00
ATOM    224  O   ILE   212       7.040  -0.508 -11.808  1.00  1.00
ATOM    225  N   GLU   213       8.704  -1.128 -13.152  1.00  1.00
ATOM    226  CA  GLU   213       9.264  -2.104 -12.260  1.00  1.00
ATOM    227  C   GLU   213      10.296  -1.520 -11.360  1.00  1.00
ATOM    228  O   GLU   213      10.660  -2.136 -10.344  1.00  1.00
TER
END


