
PFRMAT AL
TARGET T0100
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1idk
V   32 V 1
S   33 G 2
K   34 V 3
S   35 S 4
S   36 G 5
S   37 S 6
D   38 G 16
G   39 G 17
K   40 G 18
T   41 S 19
F   42 A 20
K   43 T 21
T   44 T 27
I   45 I 28
A   46 D 29
D   47 E 30
A   48 L 31
I   49 V 32
A   50 S 33
S   51 Y 34
A   52 L 35
P   53 G 36
A   54 D 37
G   55 D 38
S   56 E 39
T   57 A 40
P   58 R 41
F   59 V 42
V   60 I 43
I   61 V 44
L   62 L 45
I   63 T 46
K   64 K 47
N   65 E 55
G   66 G 56
V   67 T 57
Y   68 T 58
N   69 T 59
E   70 G 60
R   71 T 61
L   72 V 74
T   73 A 75
I   74 I 76
T   75 D 77
R   76 Q 78
N   77 D 79
N   78 N 84
G   83 Y 85
E   84 E 86
S   85 P 87
R   86 D 88
N   87 A 89
G   88 P 90
A   89 S 91
V   90 V 92
I   91 S 93
A   92 V 94
A   93 E 95
A   94 Y 96
T   95 Y 97
A   96 N 98
A   97 A 99
G   98 G 100
T   99 T 101
D  103 L 102
G  104 G 103
S  105 I 104
K  106 T 105
W  107 V 106
G  108 T 107
T  109 S 108
A  110 N 109
G  111 K 110
S  112 S 111
S  113 S 117
T  114 S 118
I  115 G 119
T  116 A 120
I  117 I 121
S  118 K 122
A  119 G 123
K  120 K 124
D  121 G 125
F  122 S 130
S  123 G 131
A  124 A 132
Q  125 E 133
S  126 N 134
L  127 I 135
T  128 I 136
I  129 I 137
R  130 Q 138
N  131 N 139
Q  139 I 140
A  140 A 141
K  141 V 142
S  142 T 143
D  143 D 144
S  144 I 145
D  145 N 146
S  146 P 147
S  147 K 148
K  148 Y 149
I  149 V 150
K  150 W 151
D  151 G 152
T  152 G 153
Q  153 D 154
A  154 A 155
V  155 I 156
A  156 T 157
L  157 L 158
K  169 D 159
D  170 D 160
V  171 C 161
S  172 D 162
L  173 L 163
V  174 V 164
G  175 W 165
Y  176 I 166
Q  177 D 167
D  178 H 168
T  179 V 169
L  180 T 170
Y  181 T 171
V  182 A 172
S  183 R 173
G  184 I 174
G  185 G 175
R  186 R 176
S  187 Q 177
F  188 H 178
F  189 Y 179
S  190 V 180
D  191 D 186
C  192 N 187
R  193 R 188
I  194 V 189
S  195 S 190
G  196 L 191
T  197 T 192
V  198 N 193
D  199 N 194
F  200 Y 195
I  201 I 196
F  202 D 197
G  203 G 198
D  204 D 219
G  205 A 220
T  206 L 222
A  207 V 223
L  208 T 224
F  209 M 225
N  210 K 226
N  211 G 227
C  212 N 228
D  213 Y 229
L  214 I 230
V  215 S 234
S  216 G 235
R  217 R 236
Y  218 S 237
R  219 P 238
D  221 K 239
V  222 V 240
K  223 Q 241
S  224 D 242
G  225 N 243
N  226 T 244
V  227 V 249
S  228 N 250
G  229 N 251
Y  230 Y 252
L  231 W 253
T  232 Y 254
A  233 D 255
P  234 G 258
S  235 H 259
T  236 A 260
N  237 F 261
I  238 E 262
N  239 I 263
Q  240 G 264
K  241 E 265
Y  242 G 266
G  243 G 267
L  244 Y 268
V  245 V 269
I  246 F 276
T  247 Q 277
N  248 N 278
S  249 E 289
R  250 A 290
V  251 F 291
I  252 T 292
R  253 P 294
E  254 S 295
S  255 S 296
D  256 T 297
S  257 A 298
V  258 G 299
P  259 E 300
A  260 V 301
K  261 C 302
S  262 S 303
Y  263 T 304
G  264 Y 305
L  265 L 306
G  266 G 307
R  267 R 308
P  268 D 309
W  269 C 310
H  270 V 311
P  271 I 312
T  272 N 313
T  273 G 314
T  274 F 315
F  275 G 316
S  276 S 317
D  277 S 318
G  278 G 319
R  279 T 320
Y  280 F 321
A  281 S 322
D  282 E 323
P  283 D 324
N  284 S 325
A  285 T 326
T  294 S 327
S  295 F 328
M  296 L 329
D  297 S 330
N  298 D 331
I  300 F 332
Y  301 E 333
G  302 G 334
W  303 K 335
D  304 N 336
K  305 I 337
M  306 A 338
S  307 S 339
G  308 A 340
K  309 S 341
D  310 A 342
K  311 Y 343
N  312 V 351
G  313 A 352
N  314 N 353
T  315 A 354
I  316 G 355
W  317 Q 356
F  318 G 357
N  319 N 358
P  320 L 359
TER
END

