
PFRMAT AL
TARGET T0100
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1lrx_B
A   25 G 396
T   26 S 397
T   27 I 398
Y   28 A 399
N   29 Y 400
A   30 L 401
V   31 F 402
V   32 F 403
S   33 T 404
K   34 N 405
S   35 R 406
S   36 H 407
S   37 E 408
D   38 D 415
G   39 R 416
K   40 S 417
T   41 E 418
F   42 Y 419
K   43 T 420
T   44 S 421
I   45 L 422
A   46 V 429
D   47 V 430
A   48 A 431
I   49 L 432
A   50 D 433
S   51 T 434
A   52 E 435
P   53 V 436
A   54 A 437
G   55 S 438
S   56 N 439
T   57 R 440
P   58 I 441
F   59 Y 442
V   60 W 443
I   61 S 444
L   62 D 445
I   63 L 446
K   64 S 447
N   65 Q 448
G   66 R 449
V   67 I 451
Y   68 C 452
N   69 S 453
E   70 T 454
R   71 Q 455
L   72 L 456
T   73 D 457
I   74 R 458
T   75 A 459
R   76 H 460
N   77 G 461
N   78 S 464
L   79 Y 465
H   80 D 466
L   81 T 467
K   82 V 468
G   83 I 469
E   84 S 470
S   85 R 471
R   86 D 472
N   87 I 473
G   88 Q 474
A   89 A 475
V   90 P 476
I   91 D 477
A   92 G 478
A   93 L 479
A   94 A 480
L  100 V 481
K  101 D 482
S  102 W 483
D  103 I 484
G  104 H 485
S  105 S 486
K  106 N 487
W  107 W 490
G  108 T 491
T  109 D 492
A  110 S 493
G  111 V 494
S  112 L 495
S  113 G 496
T  114 T 497
I  115 V 498
T  116 S 499
I  117 V 500
S  118 A 501
A  119 D 502
K  120 T 503
D  121 K 504
F  122 G 505
S  123 V 506
A  124 K 507
Q  125 R 508
S  126 K 509
L  127 T 510
T  128 L 511
I  129 F 512
R  130 R 513
N  131 E 514
D  132 N 515
F  133 G 516
D  134 S 517
F  135 K 518
P  136 P 519
N  138 R 520
Q  139 A 521
A  140 I 522
K  141 V 523
S  142 V 524
D  143 D 525
S  144 P 526
D  145 V 527
S  146 H 528
S  147 G 529
A  156 F 530
L  157 M 531
Y  158 Y 532
V  159 W 533
T  160 T 534
K  161 D 535
S  162 W 536
G  163 G 537
D  164 T 538
R  165 P 539
A  166 A 540
Y  167 K 541
F  168 I 542
K  169 K 543
D  170 K 544
V  171 G 545
S  172 G 546
L  173 L 547
V  174 N 548
G  175 G 549
Y  176 V 550
Q  177 D 551
D  178 I 552
T  179 Y 553
L  180 S 554
Y  181 L 555
V  182 V 556
S  183 T 557
G  184 E 558
G  185 N 559
R  186 I 560
S  187 Q 561
F  188 W 562
F  189 P 563
S  190 N 564
D  191 G 565
C  192 I 566
R  193 T 567
I  194 L 568
S  195 D 569
G  196 G 573
T  197 R 574
V  198 L 575
D  199 Y 576
F  200 W 577
I  201 V 578
F  202 S 580
G  203 K 581
D  204 L 582
G  205 H 583
T  206 S 584
A  207 I 585
L  208 S 587
F  209 I 588
N  210 D 589
N  211 G 593
C  212 N 594
D  213 R 595
L  214 K 596
V  215 T 597
S  216 I 598
R  217 L 599
Y  218 E 600
R  219 D 601
A  220 E 602
D  221 K 603
V  222 R 604
S  224 L 605
G  225 A 606
N  226 H 607
V  227 P 608
S  228 F 609
G  229 S 610
Y  230 L 611
L  231 A 612
T  232 V 613
A  233 F 614
P  234 E 615
S  235 D 616
T  236 T 621
N  237 D 622
I  238 I 623
N  239 I 624
Q  240 N 625
K  241 E 626
Y  242 A 627
G  243 I 628
L  244 F 629
V  245 S 630
I  246 A 631
T  247 S 637
N  248 D 638
S  249 V 639
R  250 N 640
V  251 L 641
I  252 L 642
R  253 A 643
E  254 E 644
S  255 N 645
D  256 L 646
S  257 L 647
V  258 S 648
P  259 P 649
Y  263 E 650
G  264 D 651
L  265 M 652
R  267 V 653
P  268 L 654
W  269 F 655
H  270 H 656
P  271 N 657
T  272 L 658
T  273 T 659
TER
END

