
PFRMAT AL
TARGET T0103
AUTHOR 7770-2312-5826
REMARK GROUP NAME: SHESTOPALOV. EXPERT GROUP.
REMARK GROUP LEADER: Shestopalov Boris V. TEAM: NO.
REMARK E-mail: shest@mail.cytspb.rssi.ru
METHOD Secondary structures predicted by DOUBLET CODE METHOD
METHOD (see SHESTOPALOV, ab initio secondary structure category)
METHOD and also various information from protein data bases are used.
METHOD Here BLAST-2 service has been fruitful (Yan P. Yuan, 
METHOD Eulenstein, O., Vingron, M. & Bork, P. 1998. Towards 
METHOD detection of orthologues in sequence databases. Bioinformatics, 
METHOD 14, 285-289).  
METHOD  
MODEL  1
PARENT 1thm
A 1 T 2
A 2 P 3
G 3 N 4
T 4 S 9 
A 5 S 10
K 6 R 11
G 7 Q 12
H 8 Y 13
N 9 G 14
P 10 P 15
T 11 Q 16
E 12 K 17
F 13 I 18
P 14 P 21
T 15 Q 22
I 16 A 23
Y 17 W 24
A 22 D 25
P 23 I 26
T 24 A 27
A 25 E 28
A 26 G 29
N 27 S 30
T 28 G 31
T 29 A 32
V 30 K 33
G 31 I 34
I 32 A 35
I 33 I 36
T 34 V 37
I 35 D 38
G 36 T 39
G 37 G 40
F 48 V 41
T 49 Q 42
S 50 S 43
A 51 N 44
N 52 P 46
G 53 D 47
L 54 L 48
A 55 A 49
S 56 V 52
V 57 V 53
N 58 G 54
T 59 G 55
Q 60 W 56
T 61 D 57
I 62 F 58
Q 63 V 59
T 64 D 60
G 65 N 61
S 66 D 62
N 68 S 63
G 69 T 64
D 70 P 65
Y 71 Q 66
D 73 N 67
D 74 G 68
Q 75 H 74
Q 76 C 75
G 77 A 76
Q 78 G 77
G 79 I 78
E 80 A 79
W 81 A 80
D 82 A 81
L 83 V 82
D 84 T 83
S 85 N 84
Q 86 N 85
S 87 S 86
I 88 T 87
V 89 G 88
G 90 I 89
S 91 A 90
A 92 G 91
G 93 T 92
G 94 A 93
A 95 P 94
V 96 K 95
Q 97 A 96
Q 98 S 97
L 99 I 98
L 100 L 99
F 101 A 100
Y 102 V 101
M 103 R 102
A 104 V 103
D 105 D 105
Q 106 N 106
S 107 S 107
A 108 G 108
S 109 S 109
G 110 G 110
N 111 T 111
T 112 T 113
G 113 A 114
L 114 V 115
T 115 A 116
Q 116 N 117
A 117 G 118
F 118 I 119
N 119 T 120
Q 120 Y 121
A 121 A 122
V 122 A 123
S 123 D 124
D 124 Q 125
N 125 G 126
A 127 A 127
K 128 K 128
V 129 V 129
I 130 I 130
N 131 S 131
V 132 L 132
S 133 S 133
L 134 L 134
G 135 G 135
G 145 G 136
T 146 T 137
E 150 V 138
D 151 G 139
R 152 N 140
I 153 S 141
F 154 G 142
A 155 L 143
T 156 Q 144
A 157 Q 145
A 158 A 146
A 159 V 147
Q 160 N 148
G 161 Y 149
Q 162 A 150
T 163 S 155
F 164 V 156
S 165 V 157
V 166 V 158
S 167 A 160
S 168 A 161
G 169 G 162
D 170 N 163
E 171 A 164
G 172 G 165
V 173 N 166
Y 174 T 167
E 175 A 168
C 176 P 169
P 182 N 170
Y 187 Y 171
S 188 P 172
V 189 A 173
S 190 Y 174
W 191 Y 175
P 196 S 176
N 197 N 177
V 198 A 178
I 199 I 179
A 200 A 180
V 201 V 181
G 202 A 182
G 203 S 183
T 204 T 184
T 205 D 185
L 206 Q 186
Y 207 N 187
T 208 D 188
T 209 N 189
S 210 K 190
A 211 S 191
A 213 S 192
Y 214 F 193
S 215 S 194
N 216 T 195
V 219 Y 196
W 220 G 197
N 221 S 198
E 222 W 199
L 224 V 200
D 225 D 201
L 230 V 202
W 231 A 203
A 232 A 204
T 233 P 205
G 234 G 206
G 235 S 207
G 236 S 208
Y 237 Y 210
S 238 S 211
V 239 T 212
Y 240 Y 213
P 244 P 214
S 245 T 215
S 248 S 216
V 249 T 217
V 250 Y 218
S 251 A 219
G 252 S 220
T 253 L 221
P 254 S 222
G 255 G 223
T 286 T 224
S 287 S 225
L 288 M 226
A 289 A 227
S 290 T 228
P 291 P 229
I 292 H 230
F 293 V 231
V 294 A 232
G 295 G 233
L 296 V 234
W 297 A 235
A 298 G 236
R 299 L 237
L 300 L 238
Q 301 A 239
S 302 S 240
A 303 Q 241
S 305 G 242
N 306 R 243
A 312 S 244
A 313 A 245
S 314 S 246
F 315 I 248
Y 316 R 249
S 317 A 250
A 318 A 251
I 319 I 252
S 320 E 253
S 321 N 254
T 322 T 255
P 323 A 256
S 324 D 257
L 325 K 258
V 326 I 259
H 327 S 260
D 328 G 261
V 329 T 262
Y 336 G 263
Y 339 T 264
G 340 Y 265
Y 341 W 266
N 342 A 267
A 343 K 268
G 344 G 269
L 356 R 270
D 357 V 271
I 358 N 272
A 359 A 273
K 360 Y 274
L 361 K 275
S 362 A 276
A 363 V 277
Y 364 Q 278
I 365 Y 279
TER
END

