
PFRMAT AL
TARGET T0103
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=6.11 
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: subt
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1mee_A
A   1     P     5 
A   2     Y     6 
G   3     G     7 
T   4     I     8 
A   5     S     9 
K   6     Q    10 
G   7     I    11 
H   8     K    12 
N   9     A    13 
P  10     P    14 
T  11     A    15 
E  12     L    16 
F  13     H    17 
P  14     S    18 
S  20     Q    19 
S  21     G    20 
A  22     Y    21 
P  23     T    22 
T  24     G    23 
A  25     S    24 
N  27     N    25 
T  28     V    26 
T  29     K    27 
V  30     V    28 
G  31     A    29 
I  32     V    30 
I  33     I    31 
T  34     D    32 
I  35     S    33 
G  36     G    34 
G  37     I    35 
V  38     D    36 
S  39     S    37 
Q  40     S    38 
T  41     H    39 
L  42     P    40 
Q  43     D    41 
D  44     L    42 
Q  47     N    43 
F  48     V    44 
T  49     R    45 
S  50     G    46 
A  51     G    47 
N  52     A    48 
G  53     S    49 
L  54     F    50 
A  55     V    51 
S  56     P    52 
V  57     S    53 
N  58     E    54 
T  59     T    55 
Q  60     N    56 
T  61     P    57 
I  62     Y    58 
Q  63     Q    59 
T  64     D    60 
G  65     G    61 
S  66     S    62 
S  67     S    63 
N  68     H    64 
G  69     G    65 
D  70     T    66 
Y  71     H    67 
S  72     V    68 
D  73     A    69 
D  74     G    70 
Q  75     T    71 
Q  76     I    72 
G  77     A    73 
Q  78     A    74 
G  79     L    75 
E  80     N    76 
D  84     N    77 
S  85     S    78 
Q  86     I    79 
S  87     G    80 
I  88     V    81 
V  89     L    82 
G  90     G    83 
S  91     V    84 
A  92     A    85 
G  93     P    86 
G  94     S    87 
A  95     A    88 
V  96     S    89 
Q  97     L    90 
Q  98     Y    91 
L  99     A    92 
L 100     V    93 
F 101     K    94 
Y 102     V    95 
M 103     L    96 
A 104     D    97 
D 105     S    98 
Q 106     T    99 
S 107     G   100 
A 108     S   101 
S 109     G   102 
G 110     Q   103 
N 111     Y   104 
T 112     S   105 
G 113     W   106 
L 114     I   107 
T 115     I   108 
Q 116     N   109 
A 117     G   110 
F 118     I   111 
N 119     E   112 
Q 120     W   113 
A 121     A   114 
V 122     I   115 
S 123     S   116 
D 124     N   117 
V 132     N   118 
S 133     M   119 
L 134     D   120 
G 135     V   121 
W 136     I   122 
C 137     N   123 
E 138     M   124 
A 139     S   125 
D 140     L   126 
A 141     G   127 
N 142     G   128 
A 143     P   129 
D 144     T   130 
G 145     G   131 
T 146     S   132 
Q 148     T   133 
A 149     A   134 
E 150     L   135 
D 151     K   136 
R 152     T   137 
I 153     V   138 
F 154     V   139 
A 155     D   140 
T 156     K   141 
A 157     A   142 
A 158     V   143 
A 159     S   144 
Q 160     S   145 
G 161     G   146 
Q 162     I   147 
T 163     V   148 
F 164     V   149 
S 165     A   150 
V 166     A   151 
S 167     A   152 
S 168     A   153 
G 169     G   154 
D 170     N   155 
E 171     E   156 
G 172     G   157 
P 182     S   158 
D 183     S   159 
G 184     G   160 
S 185     S   161 
T 186     T   162 
Y 187     S   163 
S 188     T   164 
V 189     V   165 
S 190     G   166 
W 191     Y   167 
P 192     P   168 
A 193     A   169 
S 194     K   170 
S 195     Y   171 
P 196     P   172 
N 197     S   173 
V 198     T   174 
I 199     I   175 
A 200     A   176 
V 201     V   177 
G 202     G   178 
G 203     A   179 
T 204     V   180 
T 205     N   181 
L 206     S   182 
Y 207     A   183 
T 208     N   184 
T 209     Q   185 
S 210     R   186 
A 211     A   187 
G 212     S   188 
A 213     F   189 
Y 214     S   190 
S 215     S   191 
N 216     A   192 
W 246     G   193 
Q 247     S   194 
S 248     E   195 
V 249     L   196 
V 250     D   197 
S 251     V   198 
G 252     M   199 
T 253     A   200 
P 254     P   201 
G 255     G   202 
R 256     V   203 
R 257     S   204 
L 258     I   205 
L 259     Q   206 
P 260     S   207 
D 261     T   208 
I 262     L   209 
S 263     P   210 
F 264     G   211 
G 278     G   212 
Q 279     T   213 
L 280     Y   214 
Q 281     G   215 
Q 282     A   216 
I 283     Y   217 
G 284     N   218 
G 285     G   219 
T 286     T   220 
S 287     S   221 
L 288     M   222 
A 289     A   223 
S 290     T   224 
P 291     P   225 
I 292     H   226 
F 293     V   227 
V 294     A   228 
G 295     G   229 
L 296     A   230 
W 297     A   231 
A 298     A   232 
R 299     L   233 
L 300     I   234 
Q 301     L   235 
S 302     S   236 
A 303     K   237 
N 304     H   238 
S 305     P   239 
N 306     T   240 
S 307     W   241 
L 308     T   242 
G 309     N   243 
F 310     A   244 
P 311     Q   245 
A 312     V   246 
A 313     R   247 
S 314     D   248 
F 315     R   249 
Y 316     L   250 
S 317     E   251 
A 318     S   252 
G 340     T   253 
Y 341     A   254 
N 342     T   255 
A 343     Y   256 
G 346     L   257 
W 347     G   258 
Y 349     S   259 
P 350     S   260 
T 351     F   261 
G 352     Y   262 
W 353     Y   263 
G 354     G   264 
S 355     K   265 
L 356     G   266 
D 357     L   267 
I 358     I   268 
A 359     N   269 
K 360     V   270 
L 361     Q   271 
S 362     A   272 
A 363     A   273 
Y 364     A   274 
I 365     Q   275 
TER
END

