
PFRMAT AL
TARGET T0103
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.53 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1nuba2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1nub_A
Y 174     A    53 
E 175     P    54 
C 176     C    55 
N 177     Q    56 
N 178     N    57 
R 179     H    58 
G 180     H    59 
Y 181     C    60 
P 182     K    61 
D 183     H    62 
G 184     G    63 
S 185     K    64 
T 186     V    65 
Y 187     C    66 
S 188     E    67 
V 189     L    68 
S 190     D    69 
W 191     E    70 
P 192     N    71 
A 193     N    72 
S 194     T    73 
S 195     P    74 
P 196     M    75 
N 197     C    76 
V 198     V    77 
TER
END

