
PFRMAT AL
TARGET T0103
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1thm
A    5 Y 1
K    6 T 2
G    7 P 3
H    8 N 4
N    9 D 5
P   10 P 6
T   11 Q 16
E   12 K 17
F   13 I 18
P   14 Q 19
T   15 A 20
I   16 P 21
D   18 Q 22
A   19 A 23
S   20 W 24
S   21 D 25
A   22 I 26
P   23 A 27
T   24 E 28
A   25 G 29
A   26 S 30
N   27 G 31
T   28 A 32
T   29 K 33
V   30 I 34
G   31 A 35
I   32 I 36
I   33 V 37
T   34 D 38
I   35 T 39
G   36 G 40
G   37 V 41
V   38 Q 42
Q   40 S 43
T   41 N 44
L   42 H 45
Q   43 P 46
D   44 D 47
L   45 L 48
Q   46 A 49
Q   47 G 50
F   48 K 51
T   49 V 52
S   50 V 53
A   51 G 54
N   52 G 55
G   53 W 56
L   54 D 57
A   55 F 58
S   56 V 59
V   57 D 60
N   58 N 61
T   59 D 62
Q   60 S 63
T   61 T 64
I   62 P 65
Q   63 Q 66
T   64 N 67
G   65 G 68
S   66 N 69
S   67 G 70
N   68 H 71
G   69 G 72
D   70 T 73
Y   71 H 74
S   72 C 75
D   73 A 76
G   79 G 77
E   80 I 78
W   81 A 79
D   82 A 80
L   83 A 81
D   84 V 82
S   85 T 83
Q   86 N 84
S   87 N 85
I   88 S 86
V   89 T 87
G   90 G 88
S   91 I 89
A   92 A 90
G   93 G 91
G   94 T 92
A   95 A 93
V   96 A 96
Q   97 S 97
Q   98 I 98
L   99 L 99
L  100 A 100
F  101 V 101
Y  102 R 102
M  103 V 103
A  104 L 104
D  105 D 105
Q  106 N 106
S  107 S 107
A  108 G 108
S  109 S 109
G  110 G 110
N  111 T 111
T  112 W 112
G  113 T 113
L  114 A 114
T  115 V 115
Q  116 A 116
A  117 N 117
F  118 G 118
N  119 I 119
Q  120 T 120
A  121 Y 121
V  122 A 122
S  123 A 123
D  124 D 124
N  125 Q 125
V  126 G 126
A  127 A 127
K  128 K 128
V  129 V 129
I  130 I 130
N  131 S 131
V  132 L 132
S  133 S 133
L  134 L 134
G  135 G 135
W  136 G 136
C  137 T 137
E  138 V 138
A  139 G 139
A  143 N 140
D  144 S 141
G  145 G 142
T  146 L 143
L  147 Q 144
Q  148 Q 145
A  149 A 146
E  150 V 147
D  151 N 148
R  152 Y 149
I  153 A 150
F  154 W 151
A  155 N 152
T  156 K 153
G  161 G 154
Q  162 S 155
T  163 V 156
F  164 V 157
S  165 V 158
V  166 A 159
S  167 A 160
S  168 A 161
G  169 G 162
D  170 N 163
E  171 A 164
G  172 G 165
T  186 N 166
Y  187 T 167
S  188 A 168
V  189 P 169
S  190 N 170
W  191 Y 171
P  192 P 172
A  193 A 173
S  194 Y 174
S  195 Y 175
P  196 S 176
N  197 N 177
V  198 A 178
I  199 I 179
A  200 A 180
V  201 V 181
G  202 A 182
G  203 S 183
T  204 T 184
T  209 D 185
S  210 Q 186
A  211 N 187
G  212 D 188
A  213 N 189
Y  214 K 190
S  215 S 191
N  216 S 192
E  217 F 193
T  218 S 194
V  219 T 195
W  220 Y 196
N  221 G 197
E  222 S 198
G  223 W 199
L  224 V 200
D  225 D 201
S  226 V 202
V  249 A 203
V  250 A 204
S  251 P 205
G  252 G 206
T  253 S 207
P  254 S 208
G  255 I 209
R  256 Y 210
R  257 S 211
L  258 T 212
L  259 Y 213
P  260 P 214
D  261 T 215
G  278 S 216
Q  279 T 217
L  280 Y 218
Q  281 A 219
Q  282 S 220
I  283 L 221
G  284 S 222
G  285 G 223
T  286 T 224
S  287 S 225
L  288 M 226
A  289 A 227
S  290 T 228
P  291 P 229
I  292 H 230
F  293 V 231
V  294 A 232
G  295 G 233
L  296 V 234
W  297 A 235
A  298 G 236
R  299 L 237
L  300 L 238
Q  301 A 239
S  302 S 240
A  303 Q 241
N  304 G 242
S  305 R 243
N  306 S 244
S  307 A 245
A  313 S 246
S  314 N 247
F  315 I 248
Y  316 R 249
S  317 A 250
A  318 A 251
I  319 I 252
G  335 E 253
Y  336 N 254
G  337 T 255
G  338 A 256
Y  339 D 257
G  340 K 258
Y  341 I 259
N  342 S 260
G  344 G 261
T  345 T 262
G  346 G 263
W  347 T 264
D  348 Y 265
Y  349 W 266
P  350 A 267
T  351 K 268
G  352 G 269
S  355 R 270
L  356 V 271
D  357 N 272
I  358 A 273
A  359 Y 274
K  360 K 275
L  361 A 276
S  362 V 277
A  363 Q 278
Y  364 Y 279
TER
END

