
PFRMAT AL
TARGET T0103
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1dbi_A
H    8 W 1
N    9 T 2
P   10 P 3
T   11 Y 13
E   12 G 14
F   13 P 15
P   14 Q 16
T   15 N 17
I   16 T 18
Y   17 Y 19
D   18 A 23
A   19 W 24
S   20 D 25
S   21 V 26
A   22 T 27
P   23 K 28
T   24 G 29
A   25 S 30
A   26 S 31
N   27 G 32
T   28 Q 33
T   29 E 34
V   30 I 35
G   31 A 36
I   32 V 37
I   33 I 38
T   34 D 39
I   35 T 40
G   36 G 41
G   37 V 42
V   38 D 43
S   39 Y 44
T   41 T 45
L   42 H 46
Q   43 P 47
D   44 D 48
L   45 L 49
Q   46 D 50
Q   47 G 51
F   48 F 59
T   49 V 60
S   50 D 61
A   51 N 62
N   52 D 63
G   53 Y 64
L   54 D 65
A   55 P 66
S   56 M 67
V   57 D 68
N   58 N 70
T   59 N 71
Q   60 H 72
T   61 G 73
I   62 T 74
Q   63 H 75
T   64 V 76
G   65 A 77
S   66 G 78
S   67 I 79
N   68 A 80
G   69 A 81
D   70 A 82
Y   71 E 83
S   72 T 84
D   73 N 85
D   74 N 86
S   85 A 87
Q   86 T 88
S   87 G 89
I   88 I 90
V   89 A 91
G   90 G 92
S   91 M 93
A   92 A 94
G   93 P 95
A   95 N 96
V   96 T 97
Q   97 R 98
Q   98 I 99
L   99 L 100
L  100 A 101
F  101 V 102
Y  102 R 103
M  103 A 104
A  104 L 105
D  105 D 106
Q  106 R 107
S  107 N 108
A  108 G 109
S  109 S 110
G  110 G 111
N  111 T 112
T  112 S 114
G  113 D 115
L  114 I 116
T  115 A 117
Q  116 D 118
A  117 A 119
F  118 I 120
N  119 I 121
Q  120 Y 122
A  121 A 123
V  122 A 124
D  124 D 125
N  125 S 126
V  126 G 127
A  127 A 128
K  128 E 129
V  129 V 130
I  130 I 131
N  131 N 132
V  132 L 133
S  133 S 134
L  134 L 135
G  135 G 136
A  143 C 137
D  144 D 138
G  145 C 139
T  146 H 140
L  147 T 141
Q  148 T 142
A  149 T 143
E  150 L 144
D  151 E 145
R  152 N 146
I  153 A 147
F  154 V 148
A  155 N 149
T  156 Y 150
A  157 A 151
A  158 W 152
A  159 N 153
Q  160 K 154
G  161 G 155
Q  162 S 156
T  163 V 157
F  164 V 158
S  165 V 159
V  166 A 160
S  167 A 161
S  168 A 162
G  169 G 163
D  170 N 164
A  193 N 165
S  194 S 175
S  195 Y 176
P  196 E 177
N  197 N 178
V  198 V 179
I  199 I 180
A  200 A 181
V  201 V 182
G  202 G 183
G  203 A 184
T  204 V 185
T  205 D 186
S  210 Q 187
A  211 Y 188
G  212 D 189
A  213 R 190
Y  214 L 191
S  215 A 192
N  216 S 193
E  217 F 194
T  218 S 195
V  219 N 196
W  220 Y 197
N  221 G 198
E  222 T 199
G  223 W 200
L  224 V 201
D  225 D 202
S  226 V 203
V  249 V 204
V  250 A 205
S  251 P 206
G  252 G 207
T  253 V 208
P  254 D 209
G  255 I 210
R  256 V 211
R  257 S 212
L  258 T 213
L  259 I 214
P  260 T 215
D  261 G 216
I  262 N 217
S  263 R 218
F  264 Y 219
Q  281 A 220
Q  282 Y 221
I  283 M 222
G  284 S 223
G  285 G 224
T  286 T 225
S  287 S 226
L  288 M 227
A  289 A 228
S  290 S 229
P  291 P 230
I  292 H 231
F  293 V 232
V  294 A 233
G  295 G 234
L  296 L 235
W  297 A 236
A  298 A 237
R  299 L 238
L  300 L 239
Q  301 A 240
S  302 S 241
A  303 Q 242
N  304 G 243
S  305 R 244
N  306 N 245
A  312 N 246
A  313 I 247
S  314 E 248
F  315 I 249
Y  316 R 250
S  317 Q 251
A  318 A 252
I  319 I 253
S  320 E 254
S  321 Q 255
T  322 T 256
P  323 A 257
S  324 D 258
L  325 K 259
K  330 I 260
S  331 S 261
G  332 G 262
N  333 T 263
N  334 G 264
G  335 T 265
Y  336 Y 266
G  337 F 267
G  338 K 268
Y  339 Y 269
G  340 G 270
Y  341 R 271
L  356 I 272
D  357 N 273
I  358 S 274
A  359 Y 275
K  360 N 276
L  361 A 277
S  362 V 278
A  363 T 279
Y  364 Y 280
TER
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