
PFRMAT AL
TARGET T0103
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 2prk
T    4 A 1
A    5 A 2
K    6 Q 3
G    7 T 4
H    8 N 5
N    9 A 6
P   10 P 7
T   11 W 8
E   12 G 9
F   13 L 10
P   14 A 11
T   15 R 12
I   16 I 13
Y   17 S 14
D   18 S 15
A   19 T 16
S   20 S 17
S   21 D 26
A   22 E 27
P   23 S 28
T   24 A 29
A   25 G 30
A   26 Q 31
N   27 G 32
T   28 S 33
T   29 C 34
V   30 V 35
G   31 Y 36
I   32 V 37
I   33 I 38
T   34 D 39
I   35 T 40
G   36 G 41
G   37 I 42
V   38 E 43
S   39 A 44
T   41 S 45
L   42 H 46
Q   43 P 47
D   44 E 48
F   48 F 49
T   49 E 50
S   50 G 51
A   51 R 52
N   52 A 53
G   53 Q 54
L   54 M 55
A   55 V 56
S   56 K 57
V   57 T 58
N   58 Y 59
T   59 Y 60
Q   60 Y 61
T   61 S 62
D   74 S 63
Q   75 R 64
Q   76 D 65
G   77 G 66
Q   78 N 67
G   79 G 68
E   80 H 69
W   81 G 70
D   82 T 71
L   83 H 72
D   84 C 73
S   85 A 74
Q   86 G 75
S   87 T 76
I   88 V 77
V   89 G 78
G   90 S 79
S   91 R 80
A   92 T 81
G   93 Y 82
G   94 G 83
A   95 V 84
V   96 A 85
Q   97 K 86
Q   98 K 87
L   99 G 92
L  100 V 93
F  101 K 94
Y  102 V 95
M  103 L 96
A  104 D 97
D  105 D 98
Q  106 N 99
S  107 G 100
A  108 S 101
S  109 G 102
G  110 Q 103
N  111 Y 104
T  112 S 105
G  113 T 106
L  114 I 107
T  115 I 108
Q  116 A 109
A  117 G 110
F  118 M 111
N  119 D 112
Q  120 F 113
A  121 V 114
V  122 A 115
S  123 N 120
D  124 R 121
N  125 N 122
V  126 C 123
A  127 P 124
K  128 K 125
V  129 V 128
I  130 A 129
N  131 S 130
V  132 L 131
S  133 S 132
L  134 L 133
G  135 G 134
W  136 G 135
G  145 G 136
T  146 Y 137
L  147 S 138
Q  148 S 139
A  149 S 140
E  150 V 141
D  151 N 142
R  152 S 143
I  153 A 144
F  154 A 145
A  155 A 146
T  156 R 147
A  157 L 148
A  158 Q 149
A  159 S 150
Q  160 S 151
G  161 G 152
Q  162 V 153
T  163 M 154
F  164 V 155
S  165 A 156
V  166 V 157
S  167 A 158
S  168 A 159
G  169 G 160
D  170 N 161
E  171 N 162
G  172 N 163
V  173 A 164
Y  174 D 165
E  175 A 166
C  176 R 167
N  177 N 168
N  178 Y 169
R  179 S 170
P  192 P 171
A  193 A 172
S  194 S 173
S  195 E 174
P  196 P 175
N  197 S 176
V  198 V 177
I  199 C 178
A  200 T 179
V  201 V 180
G  202 G 181
G  203 A 182
T  208 S 183
T  209 D 184
S  210 R 185
A  211 Y 186
G  212 D 187
A  213 R 188
Y  214 R 189
S  215 S 190
N  216 S 191
E  217 F 192
T  218 S 193
V  219 N 194
W  220 Y 195
N  221 G 196
E  222 S 197
G  223 V 198
L  224 L 199
D  225 D 200
S  251 I 201
G  252 F 202
T  253 G 203
P  254 P 204
G  255 G 205
R  256 T 206
R  257 S 207
L  258 I 208
L  259 L 209
L  273 S 210
I  274 T 211
Y  275 W 212
N  276 I 213
Y  277 G 214
G  278 G 215
Q  279 S 216
L  280 T 217
Q  281 R 218
Q  282 S 219
I  283 I 220
G  284 S 221
G  285 G 222
T  286 T 223
S  287 S 224
L  288 M 225
A  289 A 226
S  290 T 227
P  291 P 228
I  292 H 229
F  293 V 230
V  294 A 231
G  295 G 232
L  296 L 233
W  297 A 234
A  298 A 235
R  299 Y 236
L  300 L 237
Q  301 M 238
S  302 T 239
A  303 L 240
N  304 G 241
S  305 K 242
N  306 T 243
S  307 T 244
G  309 A 245
F  310 A 246
P  311 S 247
A  312 A 248
A  313 C 249
S  314 R 250
F  315 Y 251
Y  316 I 252
S  317 A 253
A  318 D 254
I  319 T 255
S  320 A 256
S  321 N 257
T  322 K 258
P  323 G 259
S  324 D 260
L  325 L 261
V  326 S 262
H  327 N 263
D  328 I 264
V  329 P 265
K  330 F 266
S  331 G 267
G  332 T 268
N  333 V 269
N  334 N 270
G  335 L 271
Y  336 L 272
G  337 A 273
G  338 Y 274
Y  339 N 275
G  340 N 276
Y  341 Y 277
N  342 Q 278
A  343 A 279
TER
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