
PFRMAT AL
TARGET T0103
AUTHOR 3995-5176-6362
METHOD Chandonia & Cohen, mostly unpublished.
METHOD Uses a combination of PSI-BLAST scoring matrix
METHOD and Pred2ary secondary structure prediction.
METHOD Pred2ary page is http://www.cmpharm.ucsf.edu/~jmc/pred2ary/
METHOD The potential is documented in the paper by
METHOD Schwartz et al which is referenced on
METHOD my research page: http://www.cmpharm.ucsf.edu/~jmc/research.html
MODEL 1
PARENT 1gci
A 1 A 1
G 7 Q 2
H 8 S 3
N 9 V 4
P 10 P 5
T 11 W 6
E 12 G 7
F 13 I 8
P 14 S 9
T 15 A 13
I 16 P 14
Y 17 A 15
D 18 A 16
A 19 H 17
S 20 N 18
S 21 R 19
A 22 G 20
P 23 L 21
T 24 T 22
A 25 G 23
A 26 S 24
N 27 G 25
T 28 V 26
T 29 K 27
V 30 V 28
G 31 A 29
I 32 V 30
I 33 L 31
T 34 D 32
I 35 T 33
G 36 G 34
G 37 I 35
Q 40 S 36
T 41 T 38
L 42 H 39
Q 43 P 40
D 44 D 41
L 45 L 42
Q 46 N 43
Q 47 I 44
F 48 R 45
G 53 G 46
L 54 G 47
A 55 A 48
S 56 S 49
V 57 F 50
N 58 V 51
T 59 P 52
Q 60 G 53
T 61 E 54
I 62 P 55
Q 63 S 56
T 64 T 57
S 66 Q 59
S 67 D 60
N 68 G 61
G 69 N 62
D 70 G 63
Y 71 H 64
S 72 G 65
D 73 T 66
D 74 H 67
Q 75 V 68
Q 76 A 69
G 77 G 70
Q 78 T 71
G 79 I 72
E 80 A 73
W 81 A 74
D 82 L 75
L 83 N 76
D 84 N 77
S 85 S 78
Q 86 I 79
S 87 G 80
I 88 V 81
V 89 L 82
G 90 G 83
S 91 V 84
A 92 A 85
G 93 P 86
G 94 S 87
A 95 A 88
V 96 E 89
Q 97 L 90
Q 98 Y 91
L 99 A 92
L 100 V 93
F 101 K 94
Y 102 V 95
M 103 L 96
A 104 G 97
D 105 A 98
Q 106 S 99
S 107 G 100
A 108 S 101
S 109 G 102
G 110 S 103
N 111 V 104
T 112 S 105
G 113 S 106
L 114 I 107
T 115 A 108
Q 116 Q 109
A 117 G 110
F 118 L 111
N 119 E 112
Q 120 W 113
A 121 A 114
S 123 G 115
D 124 N 116
N 125 N 117
V 126 G 118
A 127 M 119
K 128 H 120
V 129 V 121
I 130 A 122
N 131 N 123
V 132 L 124
S 133 S 125
L 134 L 126
G 135 G 127
W 136 S 128
C 137 P 129
E 138 S 130
A 139 P 131
L 147 S 132
Q 148 A 133
A 149 T 134
E 150 L 135
D 151 E 136
R 152 Q 137
I 153 A 138
F 154 V 139
A 155 N 140
T 156 S 141
A 157 A 142
A 158 T 143
A 159 S 144
Q 160 R 145
G 161 G 146
Q 162 V 147
T 163 L 148
F 164 V 149
S 165 V 150
V 166 A 151
S 167 A 152
S 168 S 153
G 169 G 154
D 170 N 155
E 171 S 156
G 172 G 157
V 173 A 158
Y 187 G 163
S 188 S 164
V 189 I 165
S 190 S 166
W 191 Y 167
P 192 P 168
A 193 A 169
S 194 R 170
S 195 Y 171
P 196 A 172
N 197 N 173
V 198 A 174
I 199 M 175
A 200 A 176
V 201 V 177
G 202 G 178
G 203 A 179
T 204 T 180
T 205 D 181
L 206 Q 182
Y 207 N 183
T 208 N 184
T 209 N 185
S 210 R 186
A 211 A 187
G 212 S 188
A 213 F 189
Y 214 S 190
S 215 Q 191
N 216 Y 192
G 234 G 193
G 235 A 194
G 236 G 195
Y 237 L 196
Q 247 D 197
S 248 I 198
V 249 V 199
V 250 A 200
S 251 P 201
G 252 G 202
T 253 V 203
P 254 N 204
G 255 V 205
R 256 Q 206
R 257 S 207
L 258 T 208
L 259 Y 209
P 260 P 210
D 261 G 211
I 262 S 212
S 263 T 213
L 280 Y 214
Q 281 A 215
Q 282 S 216
I 283 L 217
G 284 N 218
G 285 G 219
T 286 T 220
S 287 S 221
L 288 M 222
A 289 A 223
S 290 T 224
P 291 P 225
I 292 H 226
F 293 V 227
V 294 A 228
G 295 G 229
L 296 A 230
W 297 A 231
A 298 A 232
R 299 L 233
L 300 V 234
Q 301 K 235
S 302 Q 236
A 303 K 237
N 304 N 238
S 305 P 239
N 306 S 240
P 311 W 241
A 312 S 242
A 313 N 243
S 314 V 244
F 315 Q 245
Y 316 I 246
S 317 R 247
A 318 N 248
I 319 H 249
S 320 L 250
S 321 K 251
T 322 N 252
P 323 T 253
S 324 A 254
L 325 T 255
V 326 S 256
H 327 L 257
G 346 G 258
W 347 S 259
D 348 T 260
Y 349 N 261
P 350 L 262
T 351 Y 263
G 352 G 264
W 353 S 265
G 354 G 266
S 355 L 267
L 356 V 268
D 357 N 269
I 358 A 270
A 359 E 271
K 360 A 272
L 361 A 273
G 371 T 274
H 372 R 275
TER
END

