
PFRMAT SS
TARGET T0103
AUTHOR 3878-6624-7634
REMARK -
METHOD Neural networks trained on latest version of pdb
METHOD See:
METHOD Prediction of protein secondary structure at 80 accuracy
METHOD Thomas Nordahl Petersen, Claus Lundegaard, Morten Nielsen,
METHOD Henrik Bohr, Jakob Bohr, Soren Brunak, Garry P. Gippert,
METHOD Ole Lund, Proteins, in press
MODEL 1
A C  1.00
A C  0.83
G C  0.74
T C  0.74
A C  0.78
K C  0.87
G C  0.91
H C  0.88
N C  0.93
P C  0.72
T C  0.66
E C  0.63
F C  0.69
P C  0.69
T C  0.54
I C  0.47
Y C  0.53
D C  0.64
A C  0.69
S C  0.70
S C  0.71
A C  0.77
P C  0.75
T C  0.71
A C  0.76
A C  0.87
N C  0.91
T C  0.69
T E  0.74
V E  0.87
G E  0.93
I E  0.95
I E  0.93
T E  0.80
I E  0.55
G C  0.66
G C  0.70
V C  0.63
S C  0.62
Q C  0.70
T C  0.76
L H  0.82
Q H  0.85
D H  0.88
L H  0.96
Q H  0.96
Q H  0.97
F H  0.96
T H  0.94
S H  0.89
A H  0.78
N C  0.62
G C  0.98
L C  0.95
A C  0.83
S C  0.61
V C  0.66
N C  0.66
T C  0.56
Q C  0.47
T E  0.55
I E  0.62
Q E  0.70
T E  0.65
G C  0.54
S C  0.67
S C  0.70
N C  0.80
G C  0.85
D C  0.83
Y C  0.86
S C  0.86
D C  0.88
D C  0.89
Q C  0.86
Q C  0.86
G C  0.87
Q C  0.84
G C  0.51
E E  0.61
W E  0.63
D E  0.52
L E  0.40
D C  0.41
S H  0.46
Q H  0.54
S H  0.59
I H  0.61
V H  0.60
G H  0.60
S H  0.56
A C  0.53
G C  0.85
G C  0.84
A C  0.72
V C  0.57
Q E  0.46
Q E  0.84
L E  0.91
L E  0.94
F E  0.96
Y E  0.93
M E  0.73
A C  0.62
D C  0.85
Q C  0.83
S C  0.77
A C  0.77
S C  0.85
G C  0.80
N C  0.63
T H  0.80
G H  0.92
L H  0.96
T H  0.97
Q H  0.98
A H  0.98
F H  0.98
N H  0.96
Q H  0.92
A H  0.83
V H  0.69
S C  0.52
D C  0.85
N C  0.91
V C  0.92
A C  0.89
K E  0.62
V E  0.92
I E  0.96
N E  0.96
V E  0.91
S E  0.77
L E  0.51
G C  0.71
W C  0.82
C C  0.84
E H  0.54
A H  0.60
D H  0.62
A H  0.56
N C  0.49
A H  0.48
D H  0.66
G H  0.80
T H  0.90
L H  0.92
Q H  0.94
A H  0.96
E H  0.96
D H  0.97
R H  0.98
I H  0.98
F H  0.98
A H  0.97
T H  0.96
A H  0.94
A H  0.89
A H  0.75
Q C  0.62
G C  0.96
Q C  0.73
T E  0.88
F E  0.96
S E  0.97
V E  0.96
S E  0.85
S E  0.51
G C  0.86
D C  0.90
E C  0.80
G C  0.64
V C  0.48
Y E  0.55
E E  0.53
C C  0.56
N C  0.76
N C  0.86
R C  0.91
G C  0.93
Y C  0.90
P C  0.79
D C  0.76
G C  0.78
S C  0.72
T C  0.60
Y C  0.66
S C  0.75
V C  0.72
S C  0.72
W C  0.76
P C  0.76
A C  0.76
S C  0.80
S C  0.91
P C  0.84
N E  0.57
V E  0.81
I E  0.88
A E  0.86
V E  0.75
G E  0.53
G C  0.50
T E  0.74
T E  0.86
L E  0.84
Y E  0.76
T E  0.51
T C  0.74
S C  0.79
A C  0.81
G C  0.80
A C  0.76
Y C  0.73
S C  0.83
N C  0.78
E C  0.59
T E  0.54
V E  0.63
W E  0.60
N C  0.47
E C  0.47
G E  0.48
L E  0.53
D C  0.53
S C  0.66
N C  0.82
G C  0.87
K C  0.55
L E  0.75
W E  0.80
A E  0.75
T C  0.49
G C  0.87
G C  0.92
G C  0.69
Y E  0.64
S E  0.76
V E  0.76
Y E  0.60
E C  0.67
S C  0.83
K C  0.90
P C  0.81
S C  0.71
W C  0.41
Q H  0.41
S H  0.41
V E  0.40
V E  0.41
S C  0.41
G C  0.60
T C  0.79
P C  0.81
G C  0.80
R C  0.71
R C  0.63
L C  0.64
L C  0.87
P C  0.93
D C  0.75
I C  0.49
S H  0.38
F H  0.46
D H  0.46
A H  0.44
A H  0.44
Q C  0.48
G C  0.65
T C  0.78
G C  0.70
A E  0.64
L E  0.92
I E  0.97
Y E  0.97
N E  0.89
Y E  0.61
G C  0.64
Q C  0.59
L E  0.58
Q E  0.63
Q E  0.67
I E  0.56
G C  0.68
G C  0.81
T C  0.79
S C  0.80
L C  0.78
A C  0.68
S C  0.54
P H  0.71
I H  0.88
F H  0.93
V H  0.96
G H  0.97
L H  0.98
W H  0.99
A H  0.98
R H  0.98
L H  0.95
Q H  0.89
S H  0.73
A C  0.53
N C  0.80
S C  0.90
N C  0.93
S C  0.86
L C  0.67
G C  0.63
F C  0.67
P C  0.61
A C  0.62
A H  0.68
S H  0.66
F H  0.65
Y H  0.59
S H  0.56
A H  0.54
I H  0.48
S C  0.54
S C  0.68
T C  0.86
P C  0.80
S C  0.63
L E  0.46
V E  0.52
H E  0.50
D C  0.50
V C  0.49
K C  0.56
S C  0.69
G C  0.84
N C  0.87
N C  0.80
G C  0.76
Y C  0.72
G C  0.70
G C  0.69
Y C  0.78
G C  0.79
Y C  0.67
N C  0.63
A C  0.71
G C  0.77
T C  0.79
G C  0.83
W C  0.76
D C  0.69
Y C  0.66
P C  0.66
T C  0.72
G C  0.82
W C  0.84
G C  0.82
S C  0.77
L C  0.69
D C  0.70
I H  0.79
A H  0.83
K H  0.87
L H  0.88
S H  0.89
A H  0.93
Y H  0.93
I H  0.88
R H  0.78
S H  0.59
N C  0.78
G C  0.92
F C  0.91
G C  0.96
H C  1.00
END

