
PFRMAT AL
TARGET T0104
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=4.26 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: KISc
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 2ncd_A
M   1     I   395 
E   2     F   396 
S   3     S   397 
L   4     F   398 
T   5     D   399 
Q   6     Q   400 
Y   7     V   401 
I   8     F   402 
P   9     H   403 
D  10     P   404 
E  11     L   405 
F  12     S   406 
S  13     S   407 
M  14     Q   408 
L  15     S   409 
R  16     D   410 
F  17     I   411 
G  18     F   412 
K  19     E   413 
K  20     M   414 
A  22     V   415 
E  23     S   416 
I  24     P   417 
L  25     L   418 
L  26     I   419 
K  27     Q   420 
L  28     S   421 
H  29     A   422 
T  30     L   423 
E  31     D   424 
K  32     Y   426 
A  33     N   427 
I  34     I   428 
M  35     C   429 
V  36     I   430 
Y  37     F   431 
L  38     A   432 
N  39     Y   433 
G  40     G   434 
D  41     Q   435 
L  42     T   436 
G  43     G   437 
A  44     S   438 
G  45     G   439 
K  46     K   440 
T  47     T   441 
T  48     Y   442 
L  49     T   443 
T  50     M   444 
R  51     D   445 
G  52     G   446 
M  53     V   447 
Q  55     E   449 
G  56     S   450 
I  57     V   451 
G  58     G   452 
H  59     V   453 
Q  60     I   454 
G  61     P   455 
N  62     R   456 
V  63     T   457 
K  64     V   458 
S  65     D   459 
P  66     L   460 
T  67     L   461 
Y  68     F   462 
T  69     D   463 
L  70     S   464 
V  71     I   465 
E  72     R   466 
E  73     G   467 
Y  74     Y   468 
N  75     R   469 
I  76     N   470 
A  77     L   471 
G  78     E   476 
K  79     I   477 
M  80     K   478 
I  81     A   479 
Y  82     T   480 
H  83     F   481 
F  84     L   482 
D  85     E   483 
L  86     I   484 
Y  87     Y   485 
R  88     V   488 
L  89     L   489 
A  90     Y   490 
D  91     D   491 
P  92     L   492 
E  93     N   495 
E  94     E   496 
L  95     Q   497 
E  96     K   498 
F  97     D   499 
M  98     M   500 
G  99     E   501 
I 100     I   502 
R 101     R   503 
D 102     M   504 
Y 103     A   505 
F 104     K   506 
N 105     N   507 
T 106     N   508 
D 107     K   509 
S 108     N   510 
I 109     D   511 
C 110     I   512 
L 111     Y   513 
I 112     V   514 
E 113     S   515 
S 115     N   516 
E 116     I   517 
K 117     T   518 
G 118     E   519 
Q 119     E   520 
G 120     T   521 
I 121     V   522 
L 122     L   523 
P 123     D   524 
E 124     P   525 
A 125     N   526 
D 126     H   527 
I 127     L   528 
L 128     R   529 
V 129     H   530 
N 130     L   531 
I 131     M   532 
D 132     H   533 
Y 133     T   534 
Y 134     A   535 
D 135     K   536 
D 136     M   537 
A 137     N   538 
R 138     R   539 
N 139     A   540 
I 140     T   541 
E 141     A   542 
L 142     S   543 
I 143     T   544 
A 144     A   545 
Q 145     G   546 
T 146     N   547 
N 147     E   548 
L 148     R   549 
G 149     S   550 
K 150     S   551 
N 151     R   552 
I 152     S   553 
I 153     H   554 
S 154     A   555 
A 155     V   556 
F 156     T   557 
S 157     K   558 
N 158     L   559 
TER
END

