
PFRMAT AL
TARGET T0104
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 3adk
T 30 L 5
E 31 K 6
K 32 K 7
A 33 S 8
I 34 K 9
M 35 I 10
V 36 I 11
Y 37 F 12
L 38 V 13
N 39 V 14
G 40 G 15
D 41 G 16
L 42 P 17
G 43 G 18
A 44 S 19
G 45 G 20
K 46 K 21
T 47 G 22
T 48 T 23
L 49 Q 24
T 50 C 25
R 51 E 26
G 52 K 27
M 53 I 28
L 54 V 29
Q 55 Q 30
G 56 K 31
I 57 Y 32
G 58 G 33
H 59 Y 34
Q 60 T 35
G 61 A 45
N 62 E 46
V 63 V 47
K 64 S 48
S 65 S 49
P 66 G 50
T 67 S 51
N 75 A 52
I 76 R 53
A 77 G 54
G 78 K 55
K 79 M 56
M 80 L 57
I 81 S 58
Y 82 E 59
H 83 I 60
F 84 M 61
D 85 E 62
L 86 K 63
Y 87 G 64
R 88 Q 65
L 89 L 66
A 90 V 67
D 91 P 68
P 92 L 69
E 93 E 70
E 94 T 71
L 95 V 72
E 96 L 73
F 97 D 74
M 98 M 75
G 99 L 76
I 100 R 77
R 101 D 78
D 102 A 79
Y 103 M 80
F 104 V 81
N 105 A 82
T 106 S 87
D 107 K 88
S 108 G 89
I 109 F 90
C 110 L 91
L 111 I 92
I 112 V 99
E 113 K 100
W 114 Q 101
S 115 G 102
E 116 E 103
K 117 E 104
G 118 F 105
Q 119 E 106
G 120 R 107
I 121 K 108
L 122 I 109
P 123 G 110
E 124 Q 111
A 125 P 112
D 126 T 113
I 127 L 114
L 128 L 115
V 129 L 116
N 130 Y 117
I 131 V 118
D 132 D 119
Y 133 A 120
Y 134 G 121
D 135 P 122
D 136 E 123
A 137 T 124
R 138 M 125
N 139 T 126
I 140 K 127
E 141 R 128
L 142 L 129
I 143 L 130
A 144 K 131
Q 145 R 132
T 146 G 133
N 147 E 134
L 148 T 135
TER
END

