
PFRMAT AL
TARGET T0106
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  3
PARENT 2pka_B
R 95 D 148
H 96 F 149
S 97 E 150
W 98 F 151
P 99 P 152
E 100 D 153
S 101 E 154
L 102 I 155
A 103 Q 156
C 104 C 157
D 105 V 158
E 106 Q 159
L 107 L 160
P 108 T 161
V 109 L 162
Y 110 L 163
D 111 Q 164
R 112 N 165
G 113 T 166
V 114 F 167
C 115 C 168
I 116 A 169
S 117 D 170
P 118 A 171
E 119 H 172
A 120 P 173
I 121 D 174
V 122 K 175
T 123 V 176
A 124 T 177
D 125 E 178
G 126 S 179
TER
END

