
PFRMAT AL
TARGET T0106
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1mhd_A
P 9 P 10
L 10 I 11
C 11 V 12
K 12 K 13
S 13 R 14
L 14 L 15
M 21 L 16
P 22 G 17
N 23 W 18
H 24 K 19
L 25 K 20
H 26 G 21
H 27 E 22
S 28 Q 23
T 29 N 24
Q 30 G 25
A 31 Q 26
N 32 E 27
A 33 E 28
I 34 K 29
L 35 W 30
A 36 C 31
M 37 E 32
E 38 K 33
Q 39 A 34
F 40 V 35
E 41 K 36
G 42 S 37
L 43 L 38
L 44 V 39
G 45 K 40
T 46 K 41
H 47 L 42
C 48 K 43
S 49 K 44
P 50 T 45
D 51 G 46
L 52 Q 47
L 56 L 48
C 57 D 49
A 58 E 50
M 59 L 51
Y 60 E 52
A 61 K 53
P 62 A 54
I 63 I 55
C 64 T 56
T 65 T 57
I 66 Q 58
D 67 N 59
F 68 V 60
Q 69 N 61
H 70 T 62
E 71 K 63
P 72 C 64
I 73 I 65
K 74 T 66
P 75 I 67
C 76 P 68
K 77 R 69
S 78 S 70
V 79 L 71
E 81 V 77
R 82 S 78
A 83 H 79
R 84 R 80
Q 85 K 81
G 86 G 82
C 87 L 83
E 88 P 84
P 89 H 85
I 90 V 86
L 91 I 87
I 92 Y 88
K 93 C 89
Y 94 R 90
R 95 L 91
H 96 W 92
S 97 R 93
W 98 W 94
P 99 P 95
E 100 D 96
S 101 L 97
L 102 M 106
A 103 E 107
C 104 L 108
D 105 C 109
E 106 E 110
L 107 F 111
P 108 A 112
V 109 M 115
Y 110 K 116
D 111 K 117
R 112 D 118
G 113 E 119
V 114 V 120
C 115 C 121
I 116 V 122
S 117 N 123
P 118 P 124
E 119 Y 125
A 120 H 126
I 121 Y 127
V 122 Q 128
T 123 R 129
A 124 V 130
D 125 E 131
G 126 T 132
TER
END

