
PFRMAT AL
TARGET T0106
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 3rp2_B
V 6 L 53
R 7 T 54
I 8 A 55
P 9 A 56
L 10 H 57
C 11 C 58
K 12 K 59
S 13 G 61
L 14 R 62
P 15 E 63
W 16 I 64
E 17 T 65
M 18 V 66
T 19 I 67
K 20 L 68
M 21 G 69
P 22 A 70
N 23 H 71
H 24 D 72
L 25 V 73
H 26 R 74
H 27 K 75
S 28 R 76
T 29 E 77
Q 30 S 78
A 31 T 79
N 32 Q 80
A 33 Q 81
I 34 K 82
L 35 I 83
A 36 K 84
M 37 V 85
E 38 E 86
Q 39 K 87
F 40 Q 88
E 41 I 89
G 42 I 90
L 43 H 91
L 44 E 92
G 45 S 93
T 46 Y 94
H 47 N 95
C 48 S 96
S 49 V 97
P 50 P 98
D 51 N 99
L 52 L 100
L 53 H 101
F 54 I 103
F 55 M 104
L 56 L 105
C 57 L 106
A 58 K 107
M 59 L 108
Y 60 E 109
A 61 K 110
P 62 K 111
I 63 V 112
C 64 E 113
T 65 L 114
I 66 T 115
D 67 P 116
F 68 A 117
Q 69 V 118
H 70 N 119
E 71 V 120
P 72 V 121
I 73 P 122
K 74 L 123
P 75 P 124
C 76 S 125
K 77 P 126
S 78 S 127
V 79 D 128
C 80 F 129
E 81 I 130
R 82 H 131
A 83 P 132
R 84 G 133
Q 85 A 134
G 86 M 135
C 87 C 136
E 88 W 137
P 89 A 138
I 90 A 139
L 91 K 143
I 92 T 144
K 93 G 145
Y 94 V 146
R 95 R 147
H 96 D 148
S 97 P 149
W 98 T 150
P 99 S 152
E 100 Y 153
S 101 T 154
L 102 L 155
A 103 R 156
C 104 E 157
D 105 V 158
E 106 E 159
L 107 L 160
P 108 R 161
V 109 I 162
Y 110 M 163
D 111 D 164
R 112 E 165
G 113 K 166
V 114 A 167
C 115 C 168
I 116 V 169
S 117 D 170
P 118 Y 171
A 120 Y 172
REMARK I 121 Y 160
V 122 E 173
T 123 Y 174
A 124 K 175
D 125 F 176
TER
END

