
PFRMAT AL
TARGET T0107
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.71 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1bd0a2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1bd0_A
V   1     V    21
A   2     E    22
T   3     N    23
A   4     L    24
K   5     R    25
Y   6     R    26
G   7     L    27
T   8     L    28
P   9     P    29
V  10     D    30
I  11     D    31
D  12     T    32
G  13     H    33
E  14     I    34
I  15     M    35
D  16     A    36
E  17     V    37
I  18     V    38
W  19     K    39
N  20     A    40
T  21     N    41
T  22     A    42
E  23     Y    43
E  24     G    44
I  25     H    45
E  26     G    46
R  27     D    47
K  28     V    48
A  29     Q    49
V  30     V    50
A  31     A    51
M  32     R    52
G  33     T    53
S  34     A    54
L  35     L    55
D  36     E    56
K  37     A    57
N  38     G    58
A  39     A    59
T  40     S    60
A  41     R    61
K  42     L    62
V  43     A    63
R  44     V    64
V  45     A    65
L  46     F    66
W  47     L    67
D  48     D    68
E  49     E    69
N  50     A    70
Y  51     L    71
L  52     A    72
Y  53     L    73
V  54     R    74
L  55     E    75
A  56     K    76
I  57     G    77
V  58     I    78
K  59     E    79
D  60     A    80
P  61     P    81
V  62     I    82
L  63     L    83
N  64     R    89
K  65     P    90
D  66     A    91
N  67     D    92
S  68     A    93
N  69     A    94
P  70     L    95
W  71     A    96
E  72     A    97
Q  73     Q    98
D  74     Q    99
S  75     R   100
V  76     I   101
E  77     A   102
I  78     L   103
F  79     T   104
I  80     V   105
D  81     F   106
E  82     R   107
N  83     S   108
N  84     D   109
H  85     W   110
K  86     L   111
T  87     E   112
G  88     E   113
Y  89     A   114
Y  90     S   115
E  91     A   116
D  92     L   117
D  93     Y   118
D  94     S   119
A  95     G   120
Q  96     P   121
F  97     F   122
R  98     P   123
V  99     I   124
N 100     H   125
Y 101     F   126
M 102     H   127
N 103     L   128
E 104     K   129
Q 105     M   130
T 106     D   131
F 107     T   132
G 108     G   133
T 109     M   134
G 110     G   135
G 111     R   136
S 112     D   141
P 113     E   142
A 114     E   143
R 115     E   144
F 116     T   145
K 117     K   146
T 118     R   147
A 119     I   148
V 120     V   149
K 121     A   150
L 122     L   151
I 123     I   152
E 124     E   153
G 125     R   154
G 126     H   155
Y 127     H   157
I 128     F   158
V 129     V   159
E 130     L   160
A 131     E   161
A 132     G   162
I 133     L   163
K 134     H   166
W 135     F   167
K 136     A   168
T 137     T   169
I 138     A   170
K 139     D   171
P 140     E   172
T 141     V   173
P 142     N   174
N 143     T   175
T 144     D   176
V 145     Y   177
I 146     F   178
G 147     S   179
F 148     Y   180
N 149     Q   181
I 150     Y   182
Q 151     T   183
V 152     R   184
N 153     F   185
D 154     L   186
A 155     H   187
N 156     M   188
E 157     L   189
K 158     E   190
G 159     A   202
Q 160     N   203
R 161     S   204
V 162     A   205
G 163     A   206
I 164     S   207
I 165     L   208
S 166     R   209
W 167     F   210
S 168     P   211
D 169     D   212
P 170     R   213
T 171     T   214
N 172     F   215
N 173     N   216
S 174     M   217
W 175     V   218
R 176     R   219
D 177     G   221
P 178     I   222
S 179     A   223
K 180     M   224
F 181     Y   225
G 182     G   226
N 183     L   227
L 184     A   228
R 185     P   229
L 186     S   230
I 187     P   231
K 188     G   232
TER
END

