
PFRMAT AL
TARGET T0108
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 1XNC
REMARK DATE	1995-01-05
REMARK SCORE	?
A 10 A 1
R 11 S 2
I 12 T 3
K 13 D 4
G 14 Y 5
A 15 W 6
Y 16 Q 7
Y 17 N 8
A 18 W 9
T 19 T 10
P 20 D 11
V 21 G 12
D 22 G 13
P 23 G 14
V 24 I 15
T 25 V 16
N 26 N 17
Q 27 A 18
P 28 V 19
T 29 N 20
A 30 G 21
P 31 S 22
K 32 G 23
D 33 G 24
F 34 N 25
S 35 Y 26
S 36 S 27
G 37 V 28
F 38 N 29
W 39 W 30
D 40 S 31
F 41 N 32
N 42 T 33
D 43 G 34
G 44 N 35
T 45 F 36
T 46 V 37
Q 47 V 38
G 48 G 39
F 49 K 40
G 50 G 41
V 51 W 42
N 52 T 43
P 53 T 44
D 54 G 45
S 55 S 46
P 56 P 47
I 57 F 48
T 58 R 49
A 59 T 50
I 60 I 51
N 61 N 52
V 62 Y 53
E 63 N 54
N 64 N 61
A 65 G 62
N 66 N 63
N 67 G 64
A 68 Y 65
L 69 L 66
K 70 T 67
I 71 L 68
S 72 Y 69
N 73 G 70
L 74 W 71
N 75 T 72
S 76 R 73
K 77 S 74
G 78 P 75
S 79 L 76
N 80 I 77
D 81 E 78
L 82 Y 79
S 83 Y 80
E 84 V 81
G 85 V 82
N 86 D 83
F 87 S 84
W 88 W 85
A 89 G 86
N 90 T 87
V 91 Y 88
R 92 R 89
I 93 P 90
S 94 T 91
A 95 G 92
D 96 T 93
I 97 Y 94
W 98 K 95
G 99 G 96
Q 100 T 97
S 101 V 98
I 102 K 99
N 103 C 100
I 104 D 101
Y 105 G 102
G 106 G 103
D 107 T 104
T 108 Y 105
K 109 D 106
L 110 I 107
T 111 Y 108
M 112 T 109
D 113 T 110
V 114 T 111
I 115 R 112
A 116 Y 113
P 117 N 114
T 118 A 115
P 119 P 116
V 120 S 117
N 121 I 118
V 122 D 119
S 123 G 120
I 124 D 121
A 125 R 122
A 126 T 123
I 127 T 124
P 128 F 125
Q 129 T 126
S 130 Q 127
S 131 Y 128
T 132 W 129
H 133 S 130
G 134 V 131
W 135 R 132
G 136 Q 133
N 137 S 134
P 138 K 135
T 139 R 136
R 140 P 137
A 141 T 138
R 142 G 139
I 143 S 140
V 144 N 141
W 145 A 142
T 146 T 143
N 147 I 144
N 148 T 145
F 149 F 146
V 150 T 147
A 151 C 148
Q 152 H 149
T 153 V 150
D 154 N 151
G 155 A 152
T 156 W 153
Y 157 K 154
K 158 S 155
A 159 H 156
T 160 G 157
L 161 M 158
T 162 N 159
I 163 L 160
S 164 G 161
T 165 S 162
N 166 N 163
D 167 W 164
S 168 A 165
P 169 Y 166
N 170 Q 167
F 171 V 168
N 172 M 169
T 173 A 170
I 174 T 171
A 175 G 173
T 176 Y 174
D 177 Q 175
A 178 S 176
A 179 S 177
D 180 G 178
S 181 S 179
V 182 S 180
V 183 N 181
T 184 V 182
N 185 T 183
M 186 V 184
TER
END

