
PFRMAT AL
TARGET T0109
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1ewa_B
G 70 G 40
L 71 K 41
I 72 S 42
E 73 D 43
R 74 Q 44
I 75 E 45
K 76 L 46
A 77 K 47
S 78 S 48
K 79 M 49
L 80 A 50
T 81 K 51
E 82 F 52
R 83 G 53
A 84 D 54
A 85 H 55
E 86 T 56
L 87 E 57
Q 88 K 58
T 89 V 59
L 90 F 60
D 91 N 61
F 92 L 62
L 93 M 63
K 94 M 64
K 95 E 65
C 105 V 66
G 106 A 67
N 107 D 68
S 108 R 69
I 109 A 70
A 110 T 71
D 112 D 72
K 113 C 73
R 114 V 74
F 115 P 75
L 116 L 76
V 117 A 77
K 118 S 78
Y 119 D 79
M 120 A 80
P 121 N 81
D 122 T 82
L 123 L 83
A 124 V 84
D 125 Q 85
Y 126 M 86
F 127 K 87
H 128 Q 88
Y 129 H 89
R 130 S 90
H 131 S 91
L 132 L 92
D 133 T 93
V 134 T 94
S 135 G 95
T 136 N 96
L 137 F 97
K 138 E 98
E 139 K 99
L 140 L 100
A 141 A 103
A 142 L 104
R 143 V 105
W 144 E 106
K 145 Y 107
P 146 M 108
E 147 R 109
I 148 A 110
L 149 S 111
E 150 G 112
G 151 Q 113
F 152 S 114
K 153 F 115
K 154 D 116
E 155 S 117
N 156 Q 118
T 157 S 119
H 158 W 120
L 159 D 121
A 160 R 122
L 161 F 123
D 162 G 124
D 163 K 125
I 164 N 126
R 165 L 127
E 166 V 128
S 167 S 129
I 168 A 130
E 170 L 131
L 171 S 132
A 172 S 133
Y 173 A 134
Y 174 G 135
R 175 M 136
E 176 K 137
TER
END

