
PFRMAT AL
TARGET T0109
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 1ebt
L 18 L 2
REMARK D 19 E 3
D 19 S 3
P 20 A 4
E 21 A 5
K 22 Q 6
E 23 K 7
REMARK R 24 S 8
R 24 D 8
I 25 N 9
I 26 V 10
E 27 T 11
I 28 S 12
A 29 S 13
T 30 W 14
I 31 A 15
V 32 K 16
T 33 A 17
D 34 S 18
K 35 A 19
N 36 A 20
L 37 W 21
N 38 G 22
I 39 T 23
L 40 A 24
A 41 G 25
E 42 P 26
V 45 E 27
L 46 F 28
A 47 F 29
V 48 M 30
H 49 A 31
Q 50 L 32
S 51 F 33
D 52 D 34
E 53 A 35
L 54 H 36
L 55 D 37
N 56 D 38
K 57 V 39
M 58 F 40
N 59 A 41
D 60 K 42
W 61 F 43
C 62 S 44
Q 63 G 45
E 68 F 47
N 69 S 48
G 70 G 49
L 71 A 50
I 72 A 51
E 73 K 52
R 74 G 53
I 75 T 54
K 76 V 55
A 77 K 56
S 78 N 57
K 79 T 58
L 80 P 59
T 81 E 60
E 82 M 61
R 83 A 62
A 84 A 63
A 85 Q 64
E 86 A 65
L 87 Q 66
Q 88 S 67
T 89 F 68
L 90 K 69
D 91 G 70
F 92 L 71
L 93 V 72
K 94 S 73
K 95 N 74
I 104 W 75
C 105 V 76
G 106 D 77
N 107 N 78
D 112 N 81
K 113 A 82
R 114 G 83
F 115 A 84
L 116 L 85
V 117 E 86
K 118 G 87
Y 119 Q 88
M 120 C 89
P 121 K 90
D 122 T 91
L 123 F 92
A 124 A 93
D 125 A 94
Y 126 N 95
F 127 H 96
H 128 K 97
Y 129 A 98
R 130 R 99
H 131 G 100
L 132 I 101
D 133 S 102
V 134 A 103
S 135 G 104
T 136 Q 105
L 137 L 106
K 138 E 107
E 139 A 108
L 140 A 109
A 141 F 110
A 142 K 111
R 143 V 112
W 144 L 113
K 145 S 114
P 146 G 115
E 147 F 116
I 148 M 117
L 149 K 118
E 150 S 119
G 151 Y 120
F 152 G 121
K 153 G 122
K 154 D 123
E 155 E 124
N 156 G 125
T 157 A 126
H 158 W 127
L 159 T 128
A 160 A 129
L 161 V 130
D 162 A 131
D 163 G 132
I 164 A 133
R 165 L 134
E 166 M 135
S 167 G 136
I 168 E 137
E 170 I 138
L 171 E 139
A 172 P 140
REMARK Y 173 D 141
Y 173 N 141
Y 174 M 142
TER
END

