
PFRMAT AL
TARGET T0112
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=13.72
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1keva1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1kev_A
M   1     M     1
L   6     K     2
S   7     G     3
A   8     F     4
V   9     A     5
L  10     M     6
Y  11     L     7
K  12     G     8
Q  13     I     9
N  14     N    10
D  15     K    11
L  16     L    12
R  17     G    13
L  18     W    14
E  19     I    15
Q  20     E    16
R  21     K    17
P  22     E    18
I  23     R    19
P  24     P    20
E  25     V    21
P  26     A    22
K  27     G    23
E  28     S    24
D  29     Y    25
E  30     D    26
V  31     A    27
L  32     I    28
L  33     V    29
Q  34     R    30
M  35     P    31
A  36     L    32
Y  37     A    33
V  38     V    34
G  39     S    35
I  40     P    36
C  41     C    37
G  42     T    38
S  43     S    39
D  44     D    40
V  45     I    41
H  46     H    42
Y  47     T    43
Y  48     V    44
E  49     F    45
H  50     E    46
G  51     G    47
R  52     A    48
I  53     L    49
A  54     G    50
D  55     D    51
K  59     R    52
D  60     K    53
P  61     N    54
M  62     M    55
V  63     I    56
I  64     L    57
G  65     G    58
H  66     H    59
E  67     E    60
A  68     A    61
S  69     V    62
G  70     G    63
T  71     E    64
V  72     V    65
V  73     V    66
K  74     E    67
V  75     V    68
G  76     G    69
K  77     S    70
N  78     E    71
V  79     V    72
K  80     K    73
H  81     D    74
L  82     F    75
K  83     K    76
K  84     P    77
G  85     G    78
D  86     D    79
R  87     R    80
V  88     V    81
A  89     I    82
V  90     P    84
E  91     C    85
P  92     T    86
G  93     T    87
V  94     P    88
P  95     D    89
C  96     W    90
R  97     R    91
R  98     S    92
C  99     L    93
Q 100     E    94
F 101     V    95
C 102     Q    96
K 103     A    97
E 104     G    98
G 105     F    99
K 106     Q   100
Y 107     Q   101
N 108     H   102
L 109     S   103
C 110     N   104
P 111     G   105
D 112     M   106
L 113     L   107
T 114     A   108
F 115     W   110
C 116     K   111
A 117     F   112
T 118     S   113
P 119     N   114
P 120     F   115
D 121     K   116
D 122     D   117
G 123     G   118
N 124     V   119
L 125     F   120
A 126     G   121
R 127     E   122
Y 128     Y   123
Y 129     F   124
V 130     H   125
H 131     V   126
A 132     A   129
A 133     D   130
D 134     M   131
F 135     N   132
C 136     L   133
H 137     A   134
K 138     I   135
L 139     L   136
P 140     P   137
D 141     K   138
N 142     D   139
V 143     M   140
S 144     P   141
L 145     L   142
E 146     E   143
E 147     N   144
G 148     A   145
A 149     V   146
L 150     M   147
L 151     I   148
E 152     T   149
P 153     D   150
N 314     D   315
V 315     L   316
K 316     S   317
Q 317     K   318
L 318     L   319
V 319     V   320
T 320     T   321
H 321     H   322
S 322     V   323
F 323     Y   324
K 324     H   325
L 325     F   327
E 326     D   328
Q 327     H   329
T 328     I   330
V 329     E   331
D 330     E   332
A 331     A   333
F 332     L   334
E 333     L   335
A 334     L   336
A 335     M   337
R 336     K   338
K 337     D   339
K 338     K   340
A 339     P   341
D 340     K   342
N 341     D   343
T 342     L   344
I 343     I   345
K 344     K   346
V 345     A   347
M 346     V   348
I 347     V   349
S 348     I   350
C 349     L   351
TER
END

