
PFRMAT AL
TARGET T0112
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.61 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1a9xa3
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1a9x_A
L 139     M     1
P 140     P     2
D 141     K     3
N 142     R     4
V 143     T     5
S 144     D     6
L 145     I     7
E 146     K     8
E 147     S     9
G 148     I    10
A 149     L    11
L 150     I    12
L 151     L    13
E 152     G    14
P 153     A    15
G 165     P    17
V 166     I    18
Q 167     V    19
L 168     I    20
G 169     G    21
T 170     Q    22
T 171     A    23
V 172     C    24
G 176     E    25
A 177     F    26
G 178     D    27
P 179     Y    28
I 180     S    29
G 181     G    30
L 182     A    31
V 183     Q    32
S 184     A    33
V 185     C    34
L 186     K    35
A 187     A    36
A 188     L    37
K 189     R    38
A 190     E    39
Y 191     E    40
G 192     G    41
A 193     Y    42
F 194     R    43
V 195     V    44
V 196     I    45
C 197     N    46
T 198     V    47
A 199     N    48
R 200     S    49
S 201     N    50
P 202     P    51
R 203     A    52
R 204     T    53
L 205     I    54
E 206     M    55
V 207     T    56
A 208     D    57
K 209     P    58
N 210     E    59
C 211     M    60
A 213     A    61
D 214     D    62
V 215     A    63
T 216     T    64
L 217     Y    65
V 218     I    66
V 219     E    67
D 220     P    68
P 221     I    69
A 222     H    70
K 223     W    71
E 224     E    72
E 225     V    73
E 226     V    74
S 227     R    75
S 228     K    76
I 229     I    77
I 230     I    78
E 231     E    79
R 232     K    80
I 233     E    81
R 234     R    82
P 241     P    83
N 242     D    84
V 243     A    85
T 244     V    86
I 245     L    87
D 246     P    88
C 247     T    89
S 248     M    90
G 249     G    91
N 250     G    92
E 251     Q    93
K 252     T    94
C 253     A    95
I 254     L    96
T 255     N    97
I 256     C    98
G 257     A    99
I 258     L   100
N 259     E   101
I 260     L   102
T 261     E   103
R 262     R   104
T 263     Q   105
G 264     G   106
V 319     V   107
T 320     L   108
H 321     E   109
S 322     E   110
F 323     F   111
K 324     G   112
L 325     V   113
E 326     T   114
Q 327     M   115
T 328     I   116
V 329     G   117
D 330     A   118
A 331     T   119
F 332     A   120
E 333     D   121
A 334     A   122
A 335     I   123
R 336     D   124
K 337     K   125
K 338     A   126
A 339     E   127
TER
END

