
PFRMAT AL
TARGET T0113
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1ae1_A
V    5 R 16
R    6 W 17
S    7 S 18
V    8 L 19
K    9 K 20
G   10 G 21
L   11 T 22
V   12 T 23
A   13 A 24
V   14 L 25
I   15 V 26
T   16 T 27
G   17 G 28
G   18 G 29
A   19 S 30
S   20 K 31
G   21 G 32
L   22 I 33
G   23 G 34
L   24 Y 35
S   25 A 36
T   26 I 37
A   27 V 38
K   28 E 39
R   29 E 40
L   30 L 41
V   31 A 42
G   32 G 43
Q   33 L 44
G   34 G 45
A   35 A 46
T   36 R 47
A   37 V 48
V   38 Y 49
L   39 T 50
L   40 C 51
D   41 S 52
V   42 R 53
P   43 N 54
N   44 E 55
S   45 K 56
E   46 E 57
G   47 L 58
E   48 D 59
T   49 E 60
E   50 C 61
A   51 L 62
K   52 E 63
K   53 E 67
L   54 K 68
G   55 G 69
G   56 L 70
N   57 N 71
C   58 V 72
I   59 E 73
F   60 G 74
A   61 S 75
P   62 V 76
A   63 C 77
N   64 D 78
V   65 L 79
T   66 L 80
S   67 S 81
E   68 R 82
K   69 T 83
E   70 E 84
V   71 R 85
Q   72 D 86
A   73 K 87
A   74 L 88
L   75 M 89
T   76 Q 90
L   77 T 91
A   78 V 92
K   79 A 93
E   80 H 94
K   81 V 95
F   82 F 96
G   83 G 98
R   84 K 99
I   85 L 100
D   86 N 101
V   87 I 102
A   88 L 103
V   89 V 104
N   90 N 105
C   91 N 106
A   92 A 107
G   93 G 108
I   94 V 109
Y  101 V 110
H  102 I 111
E  103 H 112
K  104 K 113
K  105 E 114
N  106 A 115
Q  107 K 116
V  108 D 117
H  109 F 118
T  110 T 119
L  111 E 120
E  112 K 121
D  113 D 122
F  114 Y 123
Q  115 N 124
R  116 I 125
V  117 I 126
I  118 M 127
N  119 G 128
V  120 T 129
N  121 N 130
L  122 F 131
I  123 E 132
G  124 A 133
T  125 A 134
F  126 Y 135
N  127 H 136
V  128 L 137
I  129 S 138
R  130 Q 139
L  131 I 140
V  132 A 141
A  133 Y 142
G  134 P 143
V  135 L 144
M  136 L 145
G  137 K 146
Q  138 A 147
G  145 S 148
Q  146 Q 149
R  147 N 150
G  148 G 151
V  149 N 152
I  150 V 153
I  151 I 154
N  152 F 155
T  153 L 156
A  154 S 157
S  155 S 158
V  156 I 159
A  157 A 160
A  158 G 161
F  159 F 162
E  160 S 163
G  161 A 164
Q  162 L 165
V  163 P 166
G  164 S 167
Q  165 V 168
A  166 S 169
A  167 L 170
Y  168 Y 171
S  169 S 172
A  170 A 173
S  171 S 174
K  172 K 175
G  173 G 176
G  174 A 177
I  175 I 178
V  176 N 179
G  177 Q 180
M  178 M 181
T  179 T 182
L  180 K 183
P  181 S 184
I  182 L 185
A  183 A 186
R  184 C 187
D  185 E 188
L  186 W 189
A  187 A 190
P  188 K 191
I  189 D 192
G  190 N 193
I  191 I 194
R  192 R 195
V  193 V 196
V  194 N 197
T  195 S 198
I  196 V 199
A  197 A 200
P  198 P 201
G  199 G 202
L  200 V 203
F  201 I 204
L  209 L 205
P  210 Q 219
D  211 K 220
K  212 E 221
V  213 E 222
R  214 I 223
N  215 D 224
F  216 N 225
L  217 F 226
A  218 I 227
S  219 V 228
Q  220 K 229
V  221 T 230
P  222 P 231
F  223 M 232
S  225 G 233
R  226 R 234
L  227 A 235
G  228 G 236
D  229 K 237
P  230 P 238
A  231 Q 239
E  232 E 240
Y  233 V 241
A  234 S 242
H  235 A 243
L  236 L 244
V  237 I 245
Q  238 A 246
M  239 F 247
V  240 L 248
I  241 C 249
E  242 A 252
N  243 A 253
P  244 S 254
F  245 Y 255
L  246 I 256
N  247 T 257
G  248 G 258
E  249 Q 259
V  250 I 260
I  251 I 261
R  252 W 262
L  253 A 263
D  254 D 264
G  255 G 265
A  256 G 266
I  257 F 267
R  258 T 268
M  259 F 273
TER
END

