
PFRMAT AL
TARGET T0113
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 2ae2_A
A    3 A 2
A    4 G 3
V    5 R 4
R    6 W 5
S    7 N 6
V    8 L 7
K    9 E 8
G   10 G 9
L   11 C 10
V   12 T 11
A   13 A 12
V   14 L 13
I   15 V 14
T   16 T 15
G   17 G 16
G   18 G 17
A   19 S 18
S   20 R 19
G   21 G 20
L   22 I 21
G   23 G 22
L   24 Y 23
S   25 G 24
T   26 I 25
A   27 V 26
K   28 E 27
R   29 E 28
L   30 L 29
V   31 A 30
G   32 S 31
Q   33 L 32
G   34 G 33
A   35 A 34
T   36 S 35
A   37 V 36
V   38 Y 37
L   39 T 38
L   40 C 39
D   41 S 40
V   42 R 41
P   43 N 42
N   44 Q 43
S   45 K 44
E   46 E 45
G   47 L 46
E   48 N 47
T   49 D 48
E   50 C 49
A   51 L 50
K   52 T 51
K   53 Q 52
L   54 K 56
G   55 G 57
G   56 F 58
N   57 K 59
C   58 V 60
I   59 E 61
F   60 A 62
A   61 S 63
P   62 V 64
A   63 C 65
N   64 D 66
V   65 L 67
T   66 S 68
S   67 S 69
E   68 R 70
K   69 S 71
E   70 E 72
V   71 R 73
Q   72 Q 74
A   73 E 75
A   74 L 76
L   75 M 77
T   76 N 78
L   77 T 79
A   78 V 80
K   79 A 81
E   80 N 82
K   81 H 83
F   82 F 84
G   83 G 86
R   84 K 87
I   85 L 88
D   86 N 89
V   87 I 90
A   88 L 91
V   89 V 92
N   90 N 93
C   91 N 94
A   92 A 95
G   93 G 96
I   94 I 97
Y  101 V 98
H  102 I 99
E  103 Y 100
K  104 K 101
K  105 E 102
N  106 A 103
Q  107 K 104
V  108 D 105
H  109 Y 106
T  110 T 107
L  111 V 108
E  112 E 109
D  113 D 110
F  114 Y 111
Q  115 S 112
R  116 L 113
V  117 I 114
I  118 M 115
N  119 S 116
V  120 I 117
N  121 N 118
L  122 F 119
I  123 E 120
G  124 A 121
T  125 A 122
F  126 Y 123
N  127 H 124
V  128 L 125
I  129 S 126
R  130 V 127
L  131 L 128
V  132 A 129
A  133 H 130
G  134 P 131
V  135 F 132
M  136 L 133
G  137 K 134
Q  138 A 135
N  139 S 136
E  140 E 137
R  147 R 138
G  148 G 139
V  149 N 140
I  150 V 141
I  151 V 142
N  152 F 143
T  153 I 144
A  154 S 145
S  155 S 146
V  156 V 147
A  157 S 148
A  158 G 149
F  159 A 150
E  160 L 151
G  161 A 152
Q  162 V 153
V  163 P 154
G  164 Y 155
Q  165 E 156
A  166 A 157
A  167 V 158
Y  168 Y 159
S  169 G 160
A  170 A 161
S  171 T 162
K  172 K 163
G  173 G 164
G  174 A 165
I  175 M 166
V  176 D 167
G  177 Q 168
M  178 L 169
T  179 T 170
L  180 R 171
P  181 C 172
I  182 L 173
A  183 A 174
R  184 F 175
D  185 E 176
L  186 W 177
A  187 A 178
P  188 K 179
I  189 D 180
G  190 N 181
I  191 I 182
R  192 R 183
V  193 V 184
V  194 N 185
T  195 G 186
I  196 V 187
A  197 G 188
P  198 P 189
G  199 G 190
L  200 V 191
F  201 I 192
A  202 A 193
T  203 T 194
P  204 E 198
L  205 M 199
L  206 T 200
T  207 I 201
T  208 Q 202
L  209 D 203
P  210 P 204
D  211 E 205
K  212 E 208
V  213 N 209
R  214 L 210
N  215 N 211
F  216 K 212
L  217 L 213
A  218 I 214
S  219 D 215
Q  220 R 216
V  221 C 217
P  222 A 218
F  223 L 219
S  225 R 220
R  226 R 221
L  227 M 222
G  228 G 223
D  229 E 224
P  230 P 225
A  231 K 226
E  232 E 227
Y  233 L 228
A  234 A 229
H  235 A 230
L  236 M 231
V  237 V 232
Q  238 A 233
M  239 F 234
V  240 L 235
I  241 C 236
E  242 A 239
N  243 A 240
P  244 S 241
F  245 Y 242
L  246 V 243
N  247 T 244
G  248 G 245
E  249 Q 246
V  250 I 247
I  251 I 248
R  252 Y 249
L  253 V 250
D  254 D 251
G  255 G 252
A  256 G 253
I  257 M 255
R  258 A 256
M  259 N 257
Q  260 C 258
TER
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