
PFRMAT AL
TARGET T0114
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 2b3c_A
M 1 L 5
I 2 V 6
N 3 E 7
R 4 K 8
T 5 T 9
D 6 G 10
C 7 C 11
E 9 K 12
N 10 K 13
S 11 T 14
Y 12 C 15
L 13 Y 16
E 14 K 17
I 15 L 18
H 16 G 19
N 17 E 20
N 18 N 21
E 19 D 22
G 20 F 23
R 21 C 24
D 22 N 25
T 23 R 26
L 24 E 27
C 25 C 28
F 26 K 29
A 27 W 30
N 28 K 31
A 29 I 33
G 30 G 34
T 31 G 35
M 32 S 36
P 33 Y 37
V 34 G 38
A 35 Y 39
I 36 C 40
Y 37 Y 41
G 38 G 42
V 39 F 43
N 40 G 44
W 41 C 45
V 42 Y 46
E 43 C 47
S 44 E 48
G 45 G 49
N 46 D 52
N 47 S 53
V 48 T 54
V 49 Q 55
T 50 T 56
L 51 W 57
Q 52 P 58
L 62 L 59
E 63 P 60
T 64 N 61
I 65 K 62
T 66 T 63
TER
END

