
PFRMAT TS
TARGET T0114
AUTHOR 7573-5202-7463
METHOD T0114 FOLD RECOGNITION
METHOD The target profile was searched against database of profiles
METHOD build from 35% NR subset of PDB. Each profile was generated 
METHOD by running 5 iteration of psiblast and dumping scoring 
METHOD matrix. The significance of each alignment was evaluated by 
METHOD randomly shuffling template profile. Top scoring hits 
METHOD (Z-score > 4.0)  were checked for compatability 
METHOD with secondary structure prediction (psipred).  
MODEL 1
PARENT 1dkr_A
ATOM      1  N   SER    11      -6.196  -9.920 -14.036  1.00 37.07
ATOM      2  CA  SER    11      -6.864 -10.544 -12.836  1.00 35.66
ATOM      3  C   SER    11      -5.960 -10.860 -11.624  1.00 34.13
ATOM      4  O   SER    11      -6.476 -11.168 -10.532  1.00 33.97
ATOM      5  N   TYR    12      -4.636 -10.892 -11.836  1.00 30.67
ATOM      6  CA  TYR    12      -3.668 -11.168 -10.760  1.00 27.75
ATOM      7  C   TYR    12      -3.112  -9.792 -10.464  1.00 25.82
ATOM      8  O   TYR    12      -2.732  -9.096 -11.420  1.00 25.84
ATOM      9  N   LEU    13      -3.148  -9.344  -9.208  1.00 23.08
ATOM     10  CA  LEU    13      -2.592  -8.032  -8.860  1.00 21.34
ATOM     11  C   LEU    13      -1.584  -8.240  -7.764  1.00 20.15
ATOM     12  O   LEU    13      -1.848  -8.984  -6.832  1.00 20.06
ATOM     13  N   ILE    15       0.888  -6.404  -4.900  1.00 15.50
ATOM     14  CA  ILE    15       1.160  -5.180  -4.160  1.00 13.49
ATOM     15  C   ILE    15       2.436  -5.364  -3.352  1.00 14.76
ATOM     16  O   ILE    15       2.808  -6.476  -2.968  1.00 14.02
ATOM     17  N   HIS    16       3.064  -4.256  -3.032  1.00 13.86
ATOM     18  CA  HIS    16       4.240  -4.312  -2.200  1.00 16.43
ATOM     19  C   HIS    16       4.008  -3.332  -1.040  1.00 15.92
ATOM     20  O   HIS    16       3.276  -2.352  -1.184  1.00 15.05
ATOM     21  N   ASN    17       4.580  -3.632   0.116  1.00 16.75
ATOM     22  CA  ASN    17       4.472  -2.744   1.260  1.00 17.27
ATOM     23  C   ASN    17       5.904  -2.260   1.536  1.00 18.17
ATOM     24  O   ASN    17       6.772  -2.424   0.672  1.00 19.30
ATOM     25  N   ASN    18       6.192  -1.744   2.720  1.00 17.35
ATOM     26  CA  ASN    18       7.516  -1.184   2.980  1.00 17.62
ATOM     27  C   ASN    18       8.740  -2.048   3.252  1.00 16.91
ATOM     28  O   ASN    18       9.860  -1.576   3.144  1.00 16.70
ATOM     29  N   GLU    19       8.552  -3.316   3.556  1.00 16.85
ATOM     30  CA  GLU    19       9.688  -4.140   3.932  1.00 17.22
ATOM     31  C   GLU    19      10.816  -4.296   2.932  1.00 17.94
ATOM     32  O   GLU    19      12.012  -4.076   3.252  1.00 18.13
ATOM     33  N   GLY    20      10.456  -4.700   1.728  1.00 17.12
ATOM     34  CA  GLY    20      11.472  -4.960   0.736  1.00 16.53
ATOM     35  C   GLY    20      10.952  -4.580  -0.628  1.00 17.47
ATOM     36  O   GLY    20      10.716  -5.452  -1.472  1.00 16.78
ATOM     37  N   ARG    21      10.788  -3.264  -0.872  1.00 17.64
ATOM     38  CA  ARG    21      10.276  -2.808  -2.164  1.00 19.63
ATOM     39  C   ARG    21      11.008  -3.296  -3.420  1.00 20.71
ATOM     40  O   ARG    21      10.360  -3.588  -4.440  1.00 19.88
ATOM     41  N   ASP    22      12.336  -3.400  -3.352  1.00 21.33
ATOM     42  CA  ASP    22      13.136  -3.860  -4.484  1.00 23.18
ATOM     43  C   ASP    22      12.880  -5.324  -4.828  1.00 21.39
ATOM     44  O   ASP    22      12.828  -5.688  -6.008  1.00 21.88
ATOM     45  N   THR    23      12.752  -6.176  -3.816  1.00 19.96
ATOM     46  CA  THR    23      12.464  -7.572  -4.100  1.00 17.21
ATOM     47  C   THR    23      11.112  -7.632  -4.804  1.00 17.01
ATOM     48  O   THR    23      10.980  -8.272  -5.852  1.00 18.89
ATOM     49  N   ALA    27      10.120  -6.928  -4.256  1.00 15.48
ATOM     50  CA  ALA    27       8.776  -6.888  -4.828  1.00 15.63
ATOM     51  C   ALA    27       8.776  -6.468  -6.308  1.00 16.48
ATOM     52  O   ALA    27       8.096  -7.064  -7.140  1.00 16.46
ATOM     53  N   ASN    28       9.572  -5.452  -6.632  1.00 17.45
ATOM     54  CA  ASN    28       9.676  -4.932  -7.992  1.00 18.90
ATOM     55  C   ASN    28      10.300  -5.992  -8.916  1.00 19.23
ATOM     56  O   ASN    28       9.752  -6.280  -9.984  1.00 18.25
ATOM     57  N   ALA    29       7.720  -8.592  -9.596  1.00 16.28
ATOM     58  CA  ALA    29       6.712  -8.060 -10.504  1.00 17.53
ATOM     59  C   ALA    29       7.196  -8.020 -11.968  1.00 17.98
ATOM     60  O   ALA    29       6.448  -8.364 -12.888  1.00 17.23
ATOM     61  N   GLY    30       8.440  -7.604 -12.180  1.00 18.80
ATOM     62  CA  GLY    30       9.032  -7.556 -13.512  1.00 20.65
ATOM     63  C   GLY    30       9.080  -8.968 -14.108  1.00 21.16
ATOM     64  O   GLY    30       8.680  -9.168 -15.252  1.00 22.30
ATOM     65  N   THR    31       9.536  -9.948 -13.332  1.00 21.37
ATOM     66  CA  THR    31       9.612 -11.308 -13.816  1.00 19.61
ATOM     67  C   THR    31       8.264 -11.884 -14.188  1.00 20.37
ATOM     68  O   THR    31       8.148 -12.500 -15.252  1.00 21.08
ATOM     69  N   MET    32       7.248 -11.748 -13.316  1.00 20.99
ATOM     70  CA  MET    32       5.940 -12.292 -13.656  1.00 19.81
ATOM     71  C   MET    32       5.288 -11.448 -14.740  1.00 20.41
ATOM     72  O   MET    32       4.508 -11.948 -15.512  1.00 21.77
ATOM     73  N   PRO    33       5.604 -10.172 -14.816  1.00 20.59
ATOM     74  CA  PRO    33       5.016  -9.380 -15.880  1.00 20.04
ATOM     75  C   PRO    33       3.824  -8.520 -15.568  1.00 20.69
ATOM     76  O   PRO    33       2.920  -8.392 -16.396  1.00 19.22
ATOM     77  N   VAL    34       3.840  -7.908 -14.384  1.00 22.42
ATOM     78  CA  VAL    34       2.756  -7.008 -13.940  1.00 21.89
ATOM     79  C   VAL    34       3.352  -5.732 -13.320  1.00 23.92
ATOM     80  O   VAL    34       4.544  -5.676 -12.952  1.00 25.33
ATOM     81  N   ALA    35       2.520  -4.708 -13.208  1.00 23.90
ATOM     82  CA  ALA    35       2.940  -3.460 -12.612  1.00 25.01
ATOM     83  C   ALA    35       2.436  -3.700 -11.212  1.00 23.76
ATOM     84  O   ALA    35       1.408  -4.364 -11.056  1.00 23.86
ATOM     85  N   ILE    36       3.108  -3.168 -10.204  1.00 23.05
ATOM     86  CA  ILE    36       2.648  -3.336  -8.828  1.00 22.57
ATOM     87  C   ILE    36       1.332  -2.556  -8.696  1.00 22.77
ATOM     88  O   ILE    36       1.128  -1.560  -9.400  1.00 22.60
ATOM     89  N   TYR    37       0.408  -3.072  -7.876  1.00 23.25
ATOM     90  CA  TYR    37      -0.888  -2.440  -7.668  1.00 24.56
ATOM     91  C   TYR    37      -0.812  -1.020  -7.120  1.00 26.70
ATOM     92  O   TYR    37       0.188  -0.632  -6.496  1.00 25.98
ATOM     93  N   GLY    38      -1.872  -0.252  -7.340  1.00 27.64
ATOM     94  CA  GLY    38      -1.944   1.132  -6.904  1.00 30.33
ATOM     95  C   GLY    38      -2.448   1.140  -5.468  1.00 32.05
ATOM     96  O   GLY    38      -3.648   0.944  -5.236  1.00 31.73
ATOM     97  N   VAL    39      -1.568   1.304  -4.504  1.00 32.70
ATOM     98  CA  VAL    39      -2.060   1.364  -3.132  1.00 34.96
ATOM     99  C   VAL    39      -1.348   2.560  -2.564  1.00 35.85
ATOM    100  O   VAL    39      -0.312   2.992  -3.128  1.00 36.75
ATOM    101  N   ASN    40      -1.828   3.012  -1.416  1.00 35.34
ATOM    102  CA  ASN    40      -1.280   4.168  -0.752  1.00 35.67
ATOM    103  C   ASN    40      -0.948   3.808   0.684  1.00 33.82
ATOM    104  O   ASN    40      -1.820   3.328   1.396  1.00 33.32
ATOM    105  N   TRP    41       0.304   3.976   1.092  1.00 31.75
ATOM    106  CA  TRP    41       0.688   3.696   2.472  1.00 29.75
ATOM    107  C   TRP    41       1.192   4.948   3.184  1.00 29.95
ATOM    108  O   TRP    41       2.376   5.264   3.192  1.00 30.36
ATOM    109  N   VAL    42       0.252   5.620   3.820  1.00 30.63
ATOM    110  CA  VAL    42       0.448   6.860   4.552  1.00 30.91
ATOM    111  C   VAL    42       0.712   6.592   6.040  1.00 30.16
ATOM    112  O   VAL    42       0.052   5.732   6.632  1.00 29.68
ATOM    113  N   GLU    43       1.608   7.376   6.648  1.00 28.77
ATOM    114  CA  GLU    43       1.860   7.280   8.084  1.00 27.97
ATOM    115  C   GLU    43       1.504   8.708   8.516  1.00 26.71
ATOM    116  O   GLU    43       2.048   9.644   7.968  1.00 27.84
ATOM    117  N   SER    44       0.472   8.884   9.340  1.00 26.00
ATOM    118  CA  SER    44       0.060  10.224   9.804  1.00 23.37
ATOM    119  C   SER    44       1.100  10.720  10.804  1.00 23.65
ATOM    120  O   SER    44       1.940   9.924  11.256  1.00 22.59
ATOM    121  N   GLY    45       1.028  11.992  11.216  1.00 23.84
ATOM    122  CA  GLY    45       2.048  12.500  12.160  1.00 24.33
ATOM    123  C   GLY    45       2.076  11.832  13.532  1.00 24.97
ATOM    124  O   GLY    45       3.156  11.676  14.120  1.00 25.91
ATOM    125  N   ASN    46       0.924  11.376  14.040  1.00 24.94
ATOM    126  CA  ASN    46       0.936  10.716  15.360  1.00 24.24
ATOM    127  C   ASN    46       1.440   9.248  15.356  1.00 23.66
ATOM    128  O   ASN    46       1.432   8.560  16.392  1.00 23.66
ATOM    129  N   ASN    47       1.868   8.772  14.188  1.00 22.13
ATOM    130  CA  ASN    47       2.352   7.408  14.072  1.00 20.79
ATOM    131  C   ASN    47       1.420   6.380  13.464  1.00 20.04
ATOM    132  O   ASN    47       1.852   5.280  13.136  1.00 19.56
ATOM    133  N   VAL    49      -0.916   4.348  10.748  1.00 21.15
ATOM    134  CA  VAL    49      -0.748   4.024   9.348  1.00 21.67
ATOM    135  C   VAL    49      -2.068   3.884   8.624  1.00 22.49
ATOM    136  O   VAL    49      -3.008   3.364   9.184  1.00 23.52
ATOM    137  N   THR    50      -2.168   4.396   7.404  1.00 24.25
ATOM    138  CA  THR    50      -3.372   4.144   6.624  1.00 25.91
ATOM    139  C   THR    50      -3.096   3.744   5.168  1.00 25.35
ATOM    140  O   THR    50      -2.332   4.384   4.460  1.00 23.89
ATOM    141  N   LEU    51      -3.656   2.608   4.796  1.00 25.45
ATOM    142  CA  LEU    51      -3.516   2.092   3.476  1.00 26.34
ATOM    143  C   LEU    51      -4.788   2.464   2.756  1.00 27.46
ATOM    144  O   LEU    51      -5.828   2.500   3.376  1.00 29.79
ATOM    145  N   GLN    52      -4.720   2.800   1.476  1.00 28.54
ATOM    146  CA  GLN    52      -5.916   3.072   0.652  1.00 28.21
ATOM    147  C   GLN    52      -5.600   2.396  -0.676  1.00 27.12
ATOM    148  O   GLN    52      -4.484   2.548  -1.180  1.00 26.30
ATOM    149  N   PHE    53      -6.500   1.520  -1.140  1.00 25.53
ATOM    150  CA  PHE    53      -6.296   0.804  -2.408  1.00 23.41
ATOM    151  C   PHE    53      -6.712   1.816  -3.444  1.00 23.69
ATOM    152  O   PHE    53      -7.888   2.216  -3.512  1.00 22.67
ATOM    153  N   GLN    54      -5.740   2.256  -4.228  1.00 23.47
ATOM    154  CA  GLN    54      -6.032   3.276  -5.208  1.00 26.41
ATOM    155  C   GLN    54      -6.736   2.852  -6.516  1.00 26.26
ATOM    156  O   GLN    54      -6.944   3.700  -7.400  1.00 26.78
ATOM    157  N   ARG    55      -7.120   1.564  -6.616  1.00 24.41
ATOM    158  CA  ARG    55      -7.824   0.992  -7.772  1.00 23.43
ATOM    159  C   ARG    55      -8.804  -0.124  -7.328  1.00 21.52
ATOM    160  O   ARG    55      -8.584  -0.760  -6.304  1.00 22.06
ATOM    161  N   ASN    56      -9.880  -0.348  -8.084  1.00 19.95
ATOM    162  CA  ASN    56     -10.840  -1.404  -7.772  1.00 17.73
ATOM    163  C   ASN    56     -10.156  -2.760  -7.908  1.00 17.94
ATOM    164  O   ASN    56      -9.492  -3.016  -8.908  1.00 17.57
ATOM    165  N   LEU    57     -10.256  -3.600  -6.884  1.00 16.94
ATOM    166  CA  LEU    57      -9.652  -4.940  -6.916  1.00 15.48
ATOM    167  C   LEU    57     -10.704  -6.036  -6.692  1.00 15.84
ATOM    168  O   LEU    57     -10.392  -7.208  -6.452  1.00 17.35
ATOM    169  N   SER    58     -11.952  -5.624  -6.840  1.00 14.24
ATOM    170  CA  SER    58     -13.132  -6.440  -6.680  1.00 13.78
ATOM    171  C   SER    58     -13.076  -7.624  -7.616  1.00 13.95
ATOM    172  O   SER    58     -13.060  -7.456  -8.808  1.00 14.37
ATOM    173  N   ASP    59     -13.036  -8.820  -7.044  1.00 14.10
ATOM    174  CA  ASP    59     -13.012 -10.040  -7.808  1.00 13.05
ATOM    175  C   ASP    59     -11.624 -10.492  -8.180  1.00 15.03
ATOM    176  O   ASP    59     -11.468 -11.568  -8.716  1.00 14.87
ATOM    177  N   PRO    60     -10.608  -9.720  -7.816  1.00 14.77
ATOM    178  CA  PRO    60      -9.224 -10.024  -8.132  1.00 15.57
ATOM    179  C   PRO    60      -8.488 -10.884  -7.104  1.00 15.85
ATOM    180  O   PRO    60      -8.832 -10.872  -5.916  1.00 15.44
ATOM    181  N   ARG    61      -7.512 -11.656  -7.584  1.00 14.01
ATOM    182  CA  ARG    61      -6.680 -12.448  -6.692  1.00 15.93
ATOM    183  C   ARG    61      -5.520 -11.496  -6.408  1.00 16.50
ATOM    184  O   ARG    61      -4.828 -11.064  -7.344  1.00 16.29
ATOM    185  N   LEU    62      -5.352 -11.120  -5.140  1.00 15.78
ATOM    186  CA  LEU    62      -4.296 -10.176  -4.740  1.00 14.19
ATOM    187  C   LEU    62      -3.136 -10.820  -4.008  1.00 14.23
ATOM    188  O   LEU    62      -3.332 -11.568  -3.076  1.00 13.91
ATOM    189  N   GLU    63      -1.924 -10.480  -4.396  1.00 13.41
ATOM    190  CA  GLU    63      -0.740 -11.020  -3.744  1.00 15.25
ATOM    191  C   GLU    63      -0.084  -9.860  -3.024  1.00 15.84
ATOM    192  O   GLU    63      -0.076  -8.752  -3.548  1.00 17.23
ATOM    193  N   LEU    67       3.408  -8.672  -1.112  1.00 13.62
ATOM    194  CA  LEU    67       4.776  -9.044  -0.840  1.00 13.33
ATOM    195  C   LEU    67       5.288  -8.248   0.348  1.00 12.80
ATOM    196  O   LEU    67       5.392  -7.020   0.296  1.00 11.69
ATOM    197  N   GLN    68       5.580  -8.968   1.432  1.00 12.24
ATOM    198  CA  GLN    68       6.076  -8.380   2.664  1.00 11.10
ATOM    199  C   GLN    68       6.884  -9.324   3.548  1.00 10.81
ATOM    200  O   GLN    68       6.440 -10.420   3.880  1.00 10.01
ATOM    201  N   LYS    69       8.100  -8.904   3.872  1.00 11.32
ATOM    202  CA  LYS    69       8.952  -9.616   4.800  1.00 12.02
ATOM    203  C   LYS    69       8.616  -8.924   6.104  1.00 13.34
ATOM    204  O   LYS    69       8.320  -7.720   6.108  1.00 14.17
ATOM    205  N   TRP    70       8.580  -9.676   7.196  1.00 13.36
ATOM    206  CA  TRP    70       8.288  -9.052   8.480  1.00 14.28
ATOM    207  C   TRP    70       9.620  -8.780   9.208  1.00 14.96
ATOM    208  O   TRP    70       9.852  -9.248  10.320  1.00 14.95
ATOM    209  N   GLY    71      10.488  -8.004   8.552  1.00 15.57
ATOM    210  CA  GLY    71      11.812  -7.656   9.064  1.00 16.30
ATOM    211  C   GLY    71      11.780  -6.336   9.828  1.00 17.14
ATOM    212  O   GLY    71      10.776  -5.672   9.852  1.00 18.79
ATOM    213  N   SER    72      12.904  -5.928  10.380  1.00 19.14
ATOM    214  CA  SER    72      13.044  -4.692  11.164  1.00 18.67
ATOM    215  C   SER    72      12.400  -3.480  10.492  1.00 17.43
ATOM    216  O   SER    72      12.764  -3.124   9.388  1.00 16.57
ATOM    217  N   PRO    75      11.432  -2.828  11.148  1.00 17.33
ATOM    218  CA  PRO    75      10.844  -3.144  12.456  1.00 17.12
ATOM    219  C   PRO    75       9.740  -4.128  12.244  1.00 16.27
ATOM    220  O   PRO    75       8.760  -3.812  11.576  1.00 17.95
ATOM    221  N   HIS    77       5.968  -3.632  10.200  1.00 13.34
ATOM    222  CA  HIS    77       5.740  -4.428   9.012  1.00 11.45
ATOM    223  C   HIS    77       4.572  -5.380   9.208  1.00 11.84
ATOM    224  O   HIS    77       3.800  -5.584   8.292  1.00 11.34
ATOM    225  N   ILE    78       4.412  -5.912  10.408  1.00 10.90
ATOM    226  CA  ILE    78       3.316  -6.832  10.660  1.00 10.75
ATOM    227  C   ILE    78       1.976  -6.096  10.600  1.00 11.42
ATOM    228  O   ILE    78       1.020  -6.588   9.992  1.00 11.67
ATOM    229  N   HIS    79       1.908  -4.924  11.220  1.00 12.25
ATOM    230  CA  HIS    79       0.668  -4.168  11.232  1.00 13.08
ATOM    231  C   HIS    79       0.268  -3.620   9.868  1.00 12.99
ATOM    232  O   HIS    79      -0.904  -3.652   9.528  1.00 14.92
ATOM    233  N   GLU    80       1.216  -3.124   9.076  1.00 12.05
ATOM    234  CA  GLU    80       0.824  -2.600   7.776  1.00 12.34
ATOM    235  C   GLU    80       0.336  -3.732   6.888  1.00 12.25
ATOM    236  O   GLU    80      -0.576  -3.536   6.100  1.00 13.69
ATOM    237  N   ILE    81       0.860  -4.932   7.088  1.00 10.07
ATOM    238  CA  ILE    81       0.412  -6.068   6.320  1.00  8.57
ATOM    239  C   ILE    81      -1.000  -6.444   6.744  1.00 10.10
ATOM    240  O   ILE    81      -1.840  -6.740   5.916  1.00 11.84
ATOM    241  N   LEU    82      -1.260  -6.452   8.040  1.00 10.33
ATOM    242  CA  LEU    82      -2.588  -6.800   8.512  1.00 10.17
ATOM    243  C   LEU    82      -3.648  -5.772   8.128  1.00 10.51
ATOM    244  O   LEU    82      -4.772  -6.128   7.812  1.00 10.83
ATOM    245  N   SER    83      -3.292  -4.504   8.204  1.00 11.13
ATOM    246  CA  SER    83      -4.208  -3.428   7.844  1.00 11.18
ATOM    247  C   SER    83      -4.496  -3.468   6.320  1.00 11.85
ATOM    248  O   SER    83      -5.600  -3.184   5.872  1.00 12.41
ATOM    249  N   ILE    84      -3.512  -3.868   5.532  1.00 11.50
ATOM    250  CA  ILE    84      -3.720  -3.940   4.108  1.00 11.53
ATOM    251  C   ILE    84      -4.648  -5.088   3.764  1.00 10.74
ATOM    252  O   ILE    84      -5.496  -4.932   2.908  1.00 11.47
ATOM    253  N   ILE    86      -4.492  -6.232   4.424  1.00 10.25
ATOM    254  CA  ILE    86      -5.372  -7.388   4.224  1.00  9.78
ATOM    255  C   ILE    86      -6.816  -7.008   4.576  1.00  9.76
ATOM    256  O   ILE    86      -7.772  -7.416   3.924  1.00 11.12
ATOM    257  N   TYR    87      -6.956  -6.204   5.612  1.00  9.96
ATOM    258  CA  TYR    87      -8.260  -5.772   6.032  1.00  9.94
ATOM    259  C   TYR    87      -8.932  -4.924   4.940  1.00 10.88
ATOM    260  O   TYR    87     -10.120  -5.128   4.628  1.00 10.81
TER
END


