
PFRMAT AL
TARGET T0115
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1aj2
V    7 M 1
R    8 K 2
V    9 L 3
K   10 F 4
A   11 A 5
P   12 Q 6
C   13 G 7
T   14 T 8
S   15 S 9
A   16 L 10
N   17 D 11
L   18 L 12
G   19 S 13
G   21 H 14
F   22 P 15
D   23 H 16
V   24 V 17
F   25 M 18
G   26 G 19
L   27 I 20
L   29 L 21
K   30 N 22
V   50 V 23
D   51 T 24
D   52 P 25
K   53 D 26
N   54 S 27
I   55 F 28
P   56 S 29
T   57 D 30
D   58 G 31
P   59 G 32
D   60 T 33
K   61 H 34
N   62 N 35
V   63 S 36
A   64 L 37
G   65 I 38
I   66 D 39
V   67 A 40
A   68 V 41
K   69 K 42
K   70 H 43
M   71 A 44
I   72 N 45
D   73 L 46
D   74 M 47
F   75 I 48
N   76 N 49
I   77 A 50
G   78 G 51
K   79 A 52
G   80 T 53
V   81 I 54
I   83 I 55
T   84 D 56
I   85 V 57
K   86 E 60
K   87 S 61
G   88 T 62
V   89 R 63
K   90 P 64
A   91 G 65
G   92 A 66
S   93 A 67
G   94 E 68
L   95 V 69
G   96 S 70
S   97 V 71
S   98 E 72
A   99 E 73
A  100 E 74
S  101 L 75
S  102 V 78
A  103 I 79
G  104 P 80
T  105 V 81
A  106 V 82
Y  107 E 83
A  108 A 84
I  109 I 85
N  110 A 86
E  111 Q 87
L  112 R 88
F  113 F 89
K  114 E 90
L  115 V 91
N  116 D 96
L  117 T 97
D  118 S 98
K  119 K 99
L  120 P 100
K  121 E 101
L  122 V 102
V  123 I 103
G  129 R 104
E  130 E 105
L  131 S 106
A  132 A 107
S  133 K 108
S  134 V 109
G  135 G 110
A  136 A 111
H  138 H 112
A  139 I 113
D  140 I 114
N  141 N 115
V  142 D 116
A  143 I 117
P  144 R 118
A  145 S 119
I  146 L 120
F  147 S 121
G  148 G 124
G  149 A 125
F  150 L 126
T  151 E 127
M  152 A 128
V  153 A 129
T  154 A 130
N  155 E 131
Y  156 T 132
P  158 G 133
L  159 L 134
E  160 P 135
V  161 V 136
L  162 C 137
H  163 L 138
I  164 M 139
P  165 H 140
I  166 M 141
D  167 Q 142
F  168 G 143
K  169 N 144
L  170 P 145
D  171 K 146
I  172 T 147
L  173 M 148
I  174 Q 149
A  175 E 150
I  176 A 151
P  177 P 152
N  178 K 153
I  179 Y 154
S  180 D 155
I  181 D 156
N  182 V 157
T  183 F 158
K  184 A 159
E  185 E 160
A  186 V 161
R  187 N 162
E  188 R 163
I  189 Y 164
L  190 F 165
K  197 I 166
D  198 E 167
L  199 Q 168
V  200 I 169
N  201 A 170
N  202 R 171
V  203 C 172
G  204 E 173
K  205 Q 174
A  206 A 175
C  207 G 176
G  208 I 177
M  209 A 178
V  210 K 179
Y  211 E 180
A  212 K 181
L  213 L 182
Y  214 L 194
N  215 S 195
K  216 H 196
D  217 N 197
K  218 Y 198
S  219 S 199
L  220 L 200
F  221 L 201
G  222 A 202
R  223 R 203
Y  224 L 204
M  225 A 205
M  226 E 206
S  227 F 207
D  228 H 208
K  229 H 209
V  230 F 210
I  231 N 211
E  232 L 212
P  233 P 213
V  234 L 214
R  235 R 220
G  236 K 221
K  237 S 222
L  238 M 223
I  239 I 224
P  240 G 225
N  241 Q 226
Y  242 L 227
F  243 L 228
K  244 N 229
I  245 V 230
K  246 L 236
E  247 S 237
E  248 G 238
V  249 S 239
K  250 L 240
D  251 A 241
K  252 C 242
V  253 A 243
Y  254 V 244
G  255 I 245
I  256 A 246
T  257 A 247
I  258 M 248
S  259 Q 249
G  260 G 250
S  261 A 251
G  262 H 252
I  266 I 253
A  267 I 254
F  268 R 255
P  269 V 256
K  270 H 257
E  271 D 258
E  272 V 259
F  273 K 260
E  276 E 261
V  277 T 262
E  278 V 263
N  279 E 264
I  280 A 265
L  281 M 266
R  282 R 267
Y  284 V 268
Y  285 V 269
E  286 E 270
N  287 A 271
T  288 T 272
I  289 L 273
R  290 S 274
T  291 A 275
E  292 K 276
V  293 E 277
G  294 N 278
K  295 K 279
G  296 R 280
V  297 Y 281
E  298 E 282
TER
END

