
PFRMAT AL
TARGET T0115
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  5
PARENT 1GPE_B
REMARK DATE	1999-05-05
REMARK SCORE	 1.9	27.3	16/99 (16%)
P 12 P 17
C 13 S 18
T 14 K 19
S 15 V 20
A 16 A 21
G 19 G 22
V 20 K 23
G 21 T 24
F 22 Y 25
D 23 D 26
V 24 Y 27
F 25 I 28
G 26 I 29
L 27 A 30
C 28 G 31
L 29 G 32
K 30 G 33
E 31 L 34
P 32 T 35
Y 33 G 36
D 34 L 37
V 35 T 38
I 36 V 39
E 37 A 40
V 38 A 41
E 39 K 42
A 40 L 43
I 41 T 44
D 42 E 45
D 43 N 46
K 44 P 47
E 45 K 48
I 46 I 49
I 47 K 50
I 48 V 51
E 49 L 52
V 50 V 53
D 51 I 54
D 52 E 55
K 53 K 56
N 54 G 57
I 55 F 58
P 56 Y 59
T 57 E 60
D 58 S 61
P 59 N 62
D 60 D 63
K 61 G 64
N 62 A 65
V 63 I 66
A 64 I 67
G 65 E 68
I 66 D 69
I 72 P 70
D 73 N 71
D 74 A 72
F 75 Y 73
N 76 G 74
I 77 Q 75
G 78 I 76
K 79 F 77
G 80 G 78
V 81 T 79
K 82 T 80
I 83 V 81
T 84 D 82
I 85 Q 83
K 86 N 84
K 87 N 96
G 88 N 97
V 89 I 98
K 90 K 99
A 91 A 100
G 92 G 101
S 93 K 102
G 94 G 103
L 95 L 104
G 96 G 105
S 97 G 106
S 98 S 107
A 99 T 108
TER
END

