
PFRMAT AL
TARGET T0116
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=8.49 
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd3tdt
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 3tdt
M 481     M     1
K 482     Q     2
E 483     Q     3
K 484     L     4
E 485     Q     5
R 486     N     6
E 487     V     7
V 488     I     8
Y 489     E     9
R 490     S    10
L 491     A    11
E 492     F    12
A 493     E    13
L 494     R    14
I 495     R    15
R 496     A    16
R 497     D    17
R 498     I    18
E 499     T    19
E 500     P    20
E 501     A    21
V 502     N    22
F 503     V    23
L 504     D    24
E 505     T    25
V 506     V    26
R 507     T    27
E 508     R    28
R 509     E    29
A 510     A    30
K 511     V    31
R 512     N    32
Q 513     Q    33
A 514     V    34
E 515     I    35
A 516     G    36
L 517     L    37
R 518     L    38
E 519     D    39
A 520     A    42
A 521     L    43
R 522     R    44
I 523     V    45
L 524     A    46
A 525     E    47
E 526     K    48
L 527     I    49
D 528     D    50
V 529     G    51
Y 530     Q    52
A 531     W    53
A 532     V    54
L 533     T    55
A 534     H    56
E 535     Q    57
V 536     W    58
A 537     L    59
V 538     K    60
R 539     K    61
Y 540     A    62
G 541     V    63
Y 542     L    64
V 543     L    65
R 544     S    66
P 545     F    67
R 546     R    68
F 547     I    69
G 548     N    70
D 549     D    71
R 550     N    72
L 551     K    73
Q 552     V    74
I 553     M    75
R 554     D    76
A 555     G    77
G 556     A    78
R 557     E    79
H 558     T    80
P 559     R    81
V 560     Y    82
V 561     Y    83
E 562     D    84
R 563     K    85
R 564     V    86
T 565     P    87
E 566     M    88
F 567     K    89
V 568     F    90
P 569     A    91
N 570     D    94
D 571     E    95
L 572     A    96
E 573     R    97
M 574     F    98
A 575     Q    99
H 576     K   100
E 577     E   101
L 578     G   102
V 579     F   103
L 580     R   104
I 581     V   105
T 582     V   106
G 583     P   107
P 584     P   108
N 585     A   109
M 586     T   110
A 587     V   111
G 588     R   112
K 589     Q   113
S 590     G   114
T 591     A   115
F 592     F   116
L 593     I   117
R 594     R   119
Q 595     N   120
T 596     T   121
A 597     V   122
L 598     L   123
I 599     M   124
A 600     P   125
L 601     S   126
L 602     Y   127
A 603     V   128
Q 604     N   129
V 605     I   130
G 606     G   131
S 607     A   132
F 608     Y   133
V 609     V   134
P 610     D   135
A 611     E   136
E 612     G   137
P 617     T   138
L 618     M   139
F 619     V   140
D 620     D   141
G 621     T   142
Y 623     W   143
T 624     A   144
R 625     T   145
I 626     V   146
G 627     G   147
A 628     S   148
S 629     C   149
D 630     A   150
D 631     Q   151
L 632     I   152
G 635     G   153
K 636     K   154
S 637     N   155
T 638     V   156
F 639     H   157
M 640     L   158
V 641     S   159
E 642     G   160
M 643     G   161
E 644     V   162
E 645     G   163
V 646     I   164
A 647     G   165
L 648     G   166
I 649     V   167
L 650     L   168
K 651     E   169
E 652     P   170
A 653     L   171
T 654     Q   172
E 655     A   173
N 656     N   174
S 657     P   175
L 658     T   176
V 659     I   177
L 660     I   178
L 661     E   179
D 662     D   180
E 663     N   181
V 664     I   184
G 665     G   185
R 666     A   186
G 667     R   187
T 668     S   188
S 669     E   189
S 670     V   190
L 671     V   191
D 672     E   192
G 673     G   193
V 674     V   194
A 675     I   195
I 676     V   196
A 677     E   197
T 678     E   198
A 679     S   200
V 680     V   201
A 681     I   202
A 689     S   203
Y 690     M   204
T 691     G   205
L 692     V   206
F 693     Y   207
A 694     L   208
T 695     G   209
H 696     Q   210
Y 697     S   211
F 698     T   212
E 699     R   213
L 700     I   214
T 701     Y   215
A 702     D   216
L 703     R   217
G 704     E   218
L 705     T   219
P 706     G   220
R 707     E   221
L 708     I   222
K 709     H   223
N 710     Y   224
L 711     G   225
H 712     R   226
V 713     V   227
A 714     P   228
A 719     A   229
G 720     G   230
G 721     S   231
L 722     V   232
V 723     V   233
F 724     V   234
Y 725     S   235
H 726     G   236
Q 727     N   237
V 728     L   238
L 729     P   239
P 730     S   240
G 731     K   241
S 734     D   242
K 735     G   243
S 736     S   244
Y 737     Y   245
G 738     S   246
V 739     L   247
E 740     Y   248
V 741     C   249
A 742     A   250
A 743     V   251
M 744     I   252
A 745     V   253
G 746     K   254
L 747     K   255
P 748     V   256
K 749     D   257
E 750     A   258
V 751     K   259
V 752     T   260
A 753     R   261
R 754     G   262
A 755     K   263
R 756     V   264
A 757     G   265
L 758     I   266
L 759     N   267
Q 760     E   268
A 761     L   269
M 762     L   270
A 763     R   271
A 764     T   272
R 765     I   273
R 766     D   274
TER
END

