
PFRMAT AL
TARGET T0116
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1dg3_A
D   25 H 6
Q   26 M 7
Y   27 T 8
P   28 G 9
D   29 P 10
Y   30 M 11
L   31 C 12
L   32 L 13
L   33 I 14
F   34 E 15
Q   35 N 16
V   36 T 17
G   37 N 18
D   38 G 19
F   39 R 20
Y   40 L 21
E   41 M 22
C   42 A 23
F   43 N 24
G   44 P 25
E   45 E 26
D   46 A 27
A   47 L 28
E   48 K 29
R   49 I 30
L   50 L 31
A   51 S 32
R   52 A 33
F   66 I 34
T   67 T 35
T   68 Q 36
P   69 P 37
M   70 M 38
A   71 V 44
G   72 G 45
I   73 L 46
P   74 Y 47
L   75 R 48
R   76 T 49
A   77 G 50
F   78 K 51
E   79 S 52
A   80 Y 53
Y   81 L 54
A   82 M 55
E   83 N 56
R   84 K 57
L   85 L 58
L   86 A 59
K   87 G 60
M   88 K 61
G   89 K 62
F   90 H 74
R   91 T 75
L   92 K 76
A   93 G 77
V   94 I 78
A   95 W 79
D   96 M 80
Q   97 W 81
V   98 C 82
E   99 V 83
P  100 P 84
A  101 H 85
E  102 P 86
E  103 K 87
A  104 K 88
E  105 P 89
G  106 G 90
L  107 H 91
V  108 I 92
V  112 L 93
T  113 V 94
Q  114 L 95
L  115 L 96
L  116 D 97
T  117 T 98
P  118 E 99
G  119 G 100
T  120 L 101
L  121 G 102
L  122 D 103
Q  123 V 104
E  124 E 105
S  125 K 106
L  126 G 107
L  127 D 108
P  128 N 109
R  129 Q 110
E  130 N 111
A  131 S 123
N  132 S 124
Y  133 T 125
L  134 F 126
A  135 V 127
A  136 I 152
I  137 R 153
A  138 S 154
T  139 K 155
G  140 S 156
D  141 D 167
G  142 S 168
W  143 P 176
G  144 D 177
L  145 F 178
A  146 V 179
F  147 W 180
L  148 T 181
D  149 D 184
V  150 F 185
S  151 S 186
T  152 T 197
G  153 P 198
E  154 E 200
F  155 Y 201
K  156 L 202
G  157 T 203
T  158 Y 204
V  159 S 205
L  160 L 206
K  161 K 207
S  162 N 220
K  163 L 221
S  164 P 222
A  165 R 223
L  166 L 224
Y  167 I 226
D  168 R 227
E  169 K 228
L  170 F 229
F  171 F 230
R  172 P 231
H  173 K 232
R  174 K 233
P  175 K 234
A  176 C 235
E  177 F 236
V  178 V 237
L  179 F 238
L  180 D 239
A  181 R 240
P  182 P 241
E  183 V 242
L  184 H 243
L  185 E 257
E  186 L 258
N  187 D 259
G  188 P 260
A  189 E 261
F  190 F 262
L  191 V 263
D  192 Q 264
E  193 Q 265
F  194 V 266
R  195 A 267
K  196 D 268
R  197 F 269
F  198 C 270
P  199 S 271
V  200 Y 272
M  201 I 273
L  202 F 274
S  203 S 275
E  204 N 276
A  205 S 277
P  206 K 278
F  207 T 279
E  208 K 280
P  209 T 281
E  210 S 283
G  211 G 284
E  212 G 285
G  213 I 286
P  214 Q 287
L  215 V 288
A  216 N 289
L  217 G 290
R  218 P 291
R  219 R 292
A  220 L 293
R  221 E 294
G  222 S 295
A  223 L 296
L  224 V 297
L  225 L 298
A  226 T 299
Y  227 Y 300
A  228 V 301
Q  229 N 302
R  230 A 303
T  231 I 304
Q  232 S 305
G  233 S 306
G  234 G 307
A  235 D 308
L  236 L 309
S  237 P 310
Q  239 C 311
P  240 M 312
F  241 E 313
R  242 N 314
F  243 A 315
Y  244 V 316
D  245 L 317
P  246 A 318
G  247 L 319
A  248 A 320
F  249 Q 321
M  250 I 322
R  251 E 323
L  252 N 324
P  253 S 325
E  254 A 326
A  255 A 327
T  256 V 328
L  257 Q 329
R  258 K 330
A  259 A 331
L  260 I 332
E  261 A 333
V  262 H 334
F  263 Y 335
E  264 K 342
P  265 V 343
L  266 Q 344
R  267 L 345
G  268 P 346
Q  269 T 347
D  270 E 348
T  271 S 349
L  272 L 350
F  273 Q 351
S  274 E 352
V  275 L 353
L  276 L 354
D  277 D 355
E  278 L 356
T  279 H 357
R  280 R 358
T  281 D 359
A  282 S 360
G  284 E 361
R  285 R 362
R  286 E 363
L  287 A 364
L  288 I 365
Q  289 E 366
S  290 V 367
W  291 F 368
L  292 I 369
R  293 R 370
H  294 S 371
P  295 S 372
L  296 F 373
L  297 L 379
D  298 F 380
R  299 Q 381
G  300 K 382
P  301 E 383
L  302 L 384
E  303 A 385
A  304 A 386
R  305 Q 387
L  306 L 388
D  307 K 390
R  308 K 391
V  309 R 392
E  310 D 393
G  311 D 394
F  312 F 395
V  313 C 396
R  314 K 397
E  315 Q 398
A  317 N 399
L  318 Q 400
R  319 E 401
E  320 A 402
G  321 S 403
V  322 S 404
R  323 D 405
R  324 R 406
L  325 C 407
L  326 S 408
Y  327 G 409
R  328 L 410
L  329 L 411
A  330 Q 412
D  331 V 413
L  332 I 414
E  333 S 416
R  334 P 417
L  335 L 418
A  336 E 419
T  337 E 420
R  338 E 421
L  339 V 422
E  340 K 423
L  341 A 424
G  342 G 425
R  343 I 426
A  344 Y 427
S  345 S 428
K  347 K 429
D  348 P 430
G  350 G 431
A  351 G 432
L  352 Y 433
R  353 R 434
R  354 L 435
S  355 F 436
L  356 V 437
Q  357 Q 438
I  358 K 439
L  359 L 440
P  360 Q 441
E  361 D 442
L  362 L 443
R  363 K 444
A  364 K 445
L  365 K 446
L  366 Y 447
G  367 Y 448
E  368 E 449
E  369 E 450
V  370 K 453
G  371 G 454
L  372 I 455
P  373 Q 456
D  374 A 457
L  375 E 458
S  376 E 459
P  377 I 460
L  378 L 461
K  379 Q 462
E  380 T 463
E  381 Y 464
L  382 L 465
E  383 K 466
A  384 S 467
A  385 K 468
L  386 S 470
V  387 M 471
E  388 T 472
D  389 D 473
P  390 A 474
P  391 I 475
L  392 L 476
K  393 Q 477
V  394 T 478
S  395 D 479
E  396 Q 480
G  397 T 481
L  399 L 482
I  400 T 483
R  401 E 484
E  402 K 485
G  403 E 486
Y  404 K 487
D  405 E 488
P  406 I 489
D  407 E 490
L  408 V 491
D  409 E 492
A  410 R 493
L  411 V 494
R  412 K 495
A  413 A 496
A  414 E 497
H  415 S 498
R  416 A 499
E  417 Q 500
G  418 A 501
V  419 S 502
A  420 A 503
Y  421 K 504
F  422 M 505
L  423 L 506
E  424 H 507
L  425 E 508
E  426 M 509
E  427 Q 510
R  428 R 511
E  429 K 512
R  430 N 513
E  431 E 514
R  432 Q 515
L  478 M 516
P  479 M 517
E  480 E 518
M  481 Q 519
K  482 K 520
E  483 E 521
K  484 R 522
E  485 S 523
R  486 Y 524
E  487 Q 525
V  488 E 526
Y  489 H 527
L  491 L 528
E  492 K 529
A  493 Q 530
L  494 L 531
I  495 T 532
R  496 E 533
R  497 K 534
R  498 M 535
E  499 E 536
E  500 N 537
E  501 D 538
V  502 R 539
F  503 V 540
L  504 Q 541
E  505 L 542
V  506 L 543
R  507 K 544
E  508 E 545
R  509 Q 546
A  510 E 547
K  511 R 548
R  512 T 549
Q  513 L 550
A  514 A 551
E  515 L 552
A  516 K 553
L  517 L 554
R  518 Q 555
E  519 E 556
A  520 Q 557
A  521 E 558
R  522 Q 559
I  523 L 560
L  524 L 561
A  525 K 562
E  526 E 563
L  527 R 570
D  528 I 571
V  529 M 572
Y  530 K 573
A  531 N 574
A  532 E 575
L  533 I 576
A  534 Q 577
E  535 D 578
V  536 L 579
A  537 Q 580
V  538 T 581
R  539 K 582
Y  540 M 583
TER
END

