
PFRMAT AL
TARGET T0116
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1dg3_A
P  182 G 284
E  183 G 285
L  184 I 286
L  185 Q 287
E  186 V 288
N  187 N 289
G  188 G 290
A  189 P 291
F  190 R 292
L  191 L 293
D  192 E 294
E  193 S 295
F  194 L 296
R  195 V 297
K  196 L 298
R  197 T 299
F  198 Y 300
P  199 V 301
V  200 N 302
M  201 A 303
L  202 I 304
S  203 S 305
E  204 S 306
G  211 G 307
E  212 D 308
G  213 L 309
P  214 P 310
A  216 C 311
L  217 M 312
R  218 E 313
R  219 N 314
A  220 A 315
L  224 V 316
L  225 L 317
A  226 A 318
Y  227 L 319
A  228 A 320
Q  229 Q 321
R  230 I 322
T  231 E 323
Q  232 N 324
G  233 S 325
G  234 A 326
A  235 A 327
L  236 V 328
P  246 Q 329
G  247 K 330
A  248 A 331
F  249 I 332
M  250 A 333
R  251 H 334
L  252 Y 335
P  253 E 336
E  254 Q 337
A  255 Q 338
T  256 M 339
L  257 G 340
R  258 Q 341
A  259 K 342
L  260 V 343
E  261 Q 344
R  267 L 345
G  268 P 346
Q  269 T 347
D  270 E 348
T  271 S 349
L  272 L 350
F  273 Q 351
S  274 E 352
V  275 L 353
L  276 L 354
D  277 D 355
E  278 L 356
T  279 H 357
R  280 R 358
T  281 D 359
A  282 S 360
P  283 E 361
R  285 R 362
R  286 E 363
L  287 A 364
L  288 I 365
Q  289 E 366
S  290 V 367
W  291 F 368
L  292 I 369
R  293 R 370
H  294 S 371
P  295 S 372
L  296 F 373
L  297 V 376
D  298 D 377
R  299 Q 381
G  300 K 382
P  301 E 383
L  302 L 384
E  303 A 385
A  304 A 386
R  305 Q 387
L  306 L 388
D  307 E 389
R  308 K 391
V  309 R 392
E  310 D 393
G  311 D 394
F  312 F 395
V  313 C 396
R  314 K 397
E  315 Q 400
G  316 E 401
A  317 A 402
L  318 S 403
R  319 S 404
E  320 D 405
G  321 R 406
V  322 C 407
R  323 S 408
R  324 G 409
L  325 L 410
L  326 L 411
Y  327 Q 412
R  328 V 413
L  329 I 414
L  332 F 415
E  333 S 416
R  334 P 417
L  335 L 418
A  336 E 419
T  337 E 420
R  338 E 421
L  339 V 422
E  340 K 423
L  341 A 424
G  342 G 425
R  343 I 426
A  344 Y 427
S  345 S 428
K  347 K 429
D  348 P 430
G  350 G 431
A  351 G 432
L  352 Y 433
R  353 R 434
R  354 L 435
S  355 F 436
L  356 V 437
Q  357 Q 438
I  358 K 439
L  359 L 440
P  360 Q 441
E  361 D 442
L  362 L 443
R  363 K 444
A  364 K 445
L  365 K 446
L  366 Y 447
G  367 Y 448
E  368 E 449
E  369 E 450
V  370 K 453
G  371 G 454
L  372 I 455
P  373 Q 456
D  374 A 457
L  375 E 458
S  376 E 459
P  377 I 460
L  378 L 461
K  379 Q 462
E  380 T 463
E  381 Y 464
L  382 L 465
E  383 K 466
A  384 S 467
A  385 K 468
L  386 S 470
V  387 M 471
E  388 T 472
D  389 D 473
P  390 A 474
P  391 I 475
L  392 L 476
K  393 Q 477
V  394 T 478
S  395 D 479
E  396 Q 480
G  397 T 481
L  399 L 482
I  400 T 483
R  401 E 484
E  402 K 485
G  403 E 486
Y  404 K 487
D  405 E 488
P  406 I 489
D  407 E 490
L  408 V 491
D  409 E 492
A  410 R 493
L  411 V 494
R  412 K 495
A  413 A 496
A  414 E 497
H  415 S 498
R  416 A 499
E  417 Q 500
G  418 A 501
V  419 S 502
A  420 A 503
Y  421 K 504
F  422 M 505
L  423 L 506
E  424 H 507
L  425 E 508
E  426 M 509
E  427 Q 510
R  428 R 511
E  429 K 512
R  430 N 513
E  431 E 514
R  432 Q 515
L  478 M 516
P  479 M 517
E  480 E 518
M  481 Q 519
K  482 K 520
E  483 E 521
K  484 R 522
E  485 S 523
R  486 Y 524
E  487 Q 525
V  488 E 526
Y  489 H 527
L  491 L 528
E  492 K 529
A  493 Q 530
L  494 L 531
I  495 T 532
R  496 E 533
R  497 K 534
R  498 M 535
E  499 E 536
E  500 N 537
E  501 D 538
V  502 R 539
F  503 V 540
L  504 Q 541
E  505 L 542
V  506 L 543
R  507 K 544
E  508 E 545
R  509 Q 546
A  510 E 547
K  511 R 548
R  512 T 549
Q  513 L 550
A  514 A 551
E  515 L 552
A  516 K 553
L  517 L 554
R  518 Q 555
E  519 E 556
A  520 Q 557
A  521 E 558
R  522 Q 559
I  523 L 560
L  524 L 561
A  525 K 562
E  526 E 563
L  527 R 570
D  528 I 571
V  529 M 572
Y  530 K 573
A  531 N 574
A  532 E 575
L  533 I 576
A  534 Q 577
E  535 D 578
V  536 L 579
A  537 Q 580
V  538 T 581
R  539 K 582
Y  540 M 583
TER
END

