
PFRMAT AL
TARGET T0116
AUTHOR 7023-8870-2129
METHOD Additional information
METHOD An ATPase domain located at the C-terminus belongs to the
METHOD ABC ATPase superfamily
METHOD 
METHOD SENSER identified a relationship between the target and
METHOD ATP-BINDING SUBUNIT OF THE HISTIDINE PERMEASE in the 
METHOD second round of recursive searches. An alignment
METHOD was generated using MACAW and secondary structure information.
METHOD The initial alignment was made based on sequence similarity between
METHOD the target family and the template family. Regions that could
METHOD not be aligned through sequence similarity were aligned through
METHOD conserved hydrophobicity patterns between predicted (for target 
METHOD sequence) and actual (for template) secondary structure elements.
MODEL 1
PARENT 1b0uA
L 551    L   7
Q 552    H   8
I 553    V   9
R 554    I  10
A 555    D  11
G 556    L  12
R 557    H  13
H 558    K  14
P 559    R  15
V 560    Y  16
V 561    G  17
E 562    G  18
R 563    H  19
R 564    E  20
T 565    V  21
F 567    L  22
V 568    K  23
P 569    G  24
N 570    V  25
D 571    S  26
L 572    L  27
E 573    Q  28
M 574    A  29
A 575    R  30
H 576    A  31
E 577    G  32
L 578    V  34
V 579    I  35
L 580    S  36
I 581    I  37
T 582    I  38
G 583    G  39
P 584    S  40
N 585    S  41
M 586    G  42
A 587    S  43
G 588    G  44
K 589    K  45
S 590    S  46
T 591    T  47
F 592    F  48
L 593    L  49
R 594    R  50
Q 595    C  51
T 596    I  52
A 597    N  53
L 598    F  54
I 599    L  55
A 600    E  56
L 601    K  57
L 602    P  58
A 603    S  59
Q 604    E  60
G 606    G  61
S 607    A  62
F 608    I  63
V 609    I  64
P 610    V  65
A 611    N  66
E 612    G  67
E 613    Q  68
A 614    N  69
H 615    R  94
L 616    L  95
P 617    T  96
L 618    M  97
F 619    V  98
D 620    F  99
G 621    Q 100
I 622    H 101
Y 623    F 102
T 624    N 103
R 625    L 104
I 626    W 105
G 627    S 106
A 628    H 107
S 629    M 108
D 630    T 109
D 631    V 110
L 632    L 111
A 633    E 112
G 634    N 113
G 635    V 114
K 636    M 115
S 637    E 116
T 638    A 117
F 639    P 118
M 640    I 119
V 641    Q 120
E 642    V 121
M 643    L 122
E 644    G 123
E 645    L 124
V 646    S 125
A 647    K 126
L 648    H 127
I 649    D 128
L 650    A 129
K 651    R 130
E 652    E 131
A 653    R 132
T 654    A 133
E 655    L 134
N 656    K 135
S 657    Y 136
L 658    L 137
V 659    A 138
L 660    K 139
L 661    V 140
D 662    G 141
E 663    I 142
V 664    D 143
G 665    E 144
R 666    R 145
G 667    S 155
T 668    G 156
S 669    G 157
S 670    Q 158
L 671    Q 159
D 672    Q 160
G 673    R 161
V 674    V 162
A 675    S 163
I 676    I 164
A 677    A 165
T 678    R 166
A 679    A 167
V 680    L 168
A 681    A 169
E 682    M 170
A 683    E 171
L 684    P 172
Y 690    D 173
T 691    V 174
L 692    L 175
F 693    L 176
A 694    F 177
T 695    D 178
H 696    E 179
Y 697    P 180
F 698    T 181
E 699    S 182
L 700    A 183
T 701    L 184
A 702    D 185
L 703    P 186
P 706    E 187
R 707    L 188
L 708    V 189
K 709    G 190
N 710    E 191
L 711    V 192
H 712    L 193
V 713    R 194
A 714    I 195
A 715    M 196
R 716    Q 197
E 717    Q 198
E 718    L 199
A 719    A 200
G 720    T 205
G 721    M 206
L 722    V 207
V 723    V 208
F 724    V 209
Y 725    T 210
H 726    H 211
Q 727    M 213
V 728    G 214
L 729    F 215
P 730    A 216
G 731    R 217
P 732    H 218
A 733    V 219
S 734    S 220
K 735    H 222
S 736    V 223
Y 737    I 224
G 738    F 225
V 739    L 226
E 740    H 227
V 741    Q 228
A 742    I 231
A 743    E 232
M 744    E 233
A 745    E 234
G 746    G 235
L 747    D 236
P 748    P 237
K 749    E 238
E 750    Q 239
V 751    V 240
V 752    F 241
A 753    G 242
R 754    N 243
A 755    P 244
R 756    Q 245
A 757    S 246
L 758    P 247
L 759    R 248
Q 760    L 249
A 761    Q 250
M 762    Q 251
A 763    F 252
A 764    L 253
R 765    K 254
R 766    G 255
E 767    S 256
G 768    L 257
A 769    K 258
L 770    K 259
D 771    L 260
A 772    E 261
V 773    H 262
TER
END

