
PFRMAT AL
TARGET T0117
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=8.62 
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: adk
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1uke
E  16     E     2
G  17     K     3
T  18     S     4
Q  19     K     5
P  20     P     6
F  21     N     7
T  22     V     8
V  23     V     9
L  24     F    10
I  25     V    11
E  26     L    12
G  27     G    13
N  28     G    14
I  29     P    15
G  30     G    16
S  31     S    17
G  32     G    18
K  33     K    19
T  34     G    20
T  35     T    21
Y  36     Q    22
L  37     C    23
N  38     A    24
H  39     N    25
F  40     I    26
E  41     V    27
K  42     R    28
Y  43     D    29
K  44     F    30
I  47     V    33
C  48     H    34
L  49     L    35
L  50     S    36
T  51     A    37
E  52     G    38
P  53     D    39
V  54     L    40
E  55     L    41
K  56     R    42
W  57     Q    43
R  58     E    44
N  59     Q    45
V  60     Q    46
N  61     S    47
V  63     G    48
N  64     S    49
L  65     K    50
L  66     D    51
E  67     G    52
L  68     E    53
M  69     M    54
Y  70     I    55
K  71     A    56
D  72     T    57
P  73     M    58
K  74     I    59
K  75     K    60
W  76     N    61
A  77     G    62
M  78     E    63
P  79     I    64
F  80     V    65
Q  81     P    66
S  82     S    67
Y  83     I    68
V  84     V    69
T  85     T    70
L  86     V    71
T  87     K    72
M  88     L    73
L  89     L    74
N 117     K    75
M 118     N    76
R 119     A    77
R 120     I    78
N 121     D    79
G 122     A    80
S 123     N    81
L 124     Q    82
N 130     E    95
T 131     E    96
L 132     N    97
E 133     N    98
E 134     N    99
W 135     S   100
Y 136     W   101
K 137     E   102
F 138     E   103
I 139     N   104
E 140     M   105
E 141     K   106
I 143     D   107
H 144     F   108
V 145     V   109
Q 146     D   110
A 147     T   111
D 148     K   112
L 149     F   113
I 150     V   114
I 151     L   115
Y 152     F   116
L 153     F   117
R 154     D   118
T 155     C   119
P 157     P   120
E 158     E   121
V 159     E   122
A 160     V   123
Y 161     M   124
E 162     T   125
R 163     Q   126
I 164     R   127
R 165     L   128
Q 166     L   129
R 167     K   130
A 168     R   131
R 169     G   132
S 170     E   133
E 171     S   134
E 172     S   135
L 205     G   136
D 206     R   137
A 207     S   138
D 208     D   139
L 209     D   140
N 210     N   141
L 211     I   142
E 212     E   143
N 213     S   144
I 214     I   145
G 215     K   146
T 216     K   147
E 217     R   148
Y 218     F   149
Q 219     N   150
R 220     T   151
S 221     F   152
E 222     N   153
S 223     V   154
S 224     Q   155
I 225     T   156
F 226     K   157
D 227     L   158
A 228     V   159
I 229     I   160
S 230     D   161
S 231     H   162
N 232     Y   163
Q 233     N   164
Q 234     K   165
P 235     F   166
S 236     D   167
P 237     K   170
V 238     I   171
L 239     I   172
V 240     P   173
S 241     A   174
P 242     N   175
S 243     R   176
K 244     D   177
R 245     V   178
Q 246     N   179
R 247     E   180
V 248     V   181
A 249     Y   182
R 250     N   183
TER
END

