
PFRMAT AL
TARGET T0117
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=4.31 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: gtp
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1a4r_A
T  18     M     1
Q  19     Q     2
P  20     T     3
F  21     I     4
T  22     K     5
V  23     C     6
L  24     V     7
I  25     V     8
E  26     V     9
G  27     G    10
N  28     D    11
I  29     V    12
G  30     A    13
S  31     V    14
G  32     G    15
K  33     K    16
T  34     T    17
T  35     C    18
Y  36     L    19
L  37     L    20
N  38     I    21
H  39     S    22
F  40     Y    23
E  41     T    24
K  42     T    25
Y  43     N    26
T  51     K    27
E  52     F    28
P  53     P    29
V  54     S    30
E  55     E    31
K  56     Y    32
W  57     V    33
R  58     P    34
N  59     T    35
V  60     V    36
G  62     F    37
V  63     D    38
N  64     N    39
L  65     Y    40
L  66     A    41
E  67     V    42
L  68     T    43
M  69     V    44
Y  70     M    45
K  71     I    46
D  72     G    47
P  73     G    48
K  74     E    49
K  75     P    50
W  76     Y    51
A  77     T    52
M  78     L    53
P  79     G    54
F  80     L    55
Q  81     F    56
S  82     D    57
Y  83     T    58
V  84     A    59
T  85     G    60
L  86     Q    61
T  87     E    62
M  88     D    63
L  89     Y    64
Q  90     D    65
S  91     R    66
H  92     L    67
T  93     R    68
A  94     P    69
P  95     L    70
T  96     S    71
N  97     Y    72
K  98     P    73
K  99     Q    74
L 100     T    75
S 106     D    76
I 107     V    77
F 108     F    78
S 109     L    79
A 110     V    80
R 111     C    81
Y 112     F    82
C 113     S    83
F 114     V    84
V 115     V    85
E 116     S    86
E 125     P    87
Q 126     S    88
G 127     S    89
M 128     F    90
Y 129     E    91
N 130     N    92
T 131     V    93
L 132     K    94
E 133     E    95
E 134     K    96
W 135     W    97
Y 136     V    98
K 137     P    99
F 138     E   100
I 139     I   101
E 140     T   102
E 141     H   103
S 142     H   104
I 143     C   105
H 144     P   106
A 147     K   107
D 148     T   108
L 149     P   109
I 150     F   110
I 151     L   111
Y 152     L   112
L 153     V   113
R 154     G   114
T 155     T   115
S 156     Q   116
P 157     I   117
E 158     D   118
V 159     L   119
A 160     R   120
Y 161     D   121
E 162     D   122
R 163     P   123
I 164     S   124
R 165     T   125
Q 166     I   126
R 167     E   127
A 168     K   128
R 169     L   129
S 170     A   130
E 171     K   131
E 172     N   132
S 173     K   133
C 174     Q   134
V 175     K   135
P 176     P   136
L 177     I   137
K 178     T   138
H 184     P   139
E 185     E   140
L 186     T   141
H 187     A   142
E 188     E   143
D 189     K   144
W 190     L   145
L 191     A   146
I 192     R   147
H 193     D   148
Q 194     L   149
R 195     K   150
C 200     A   151
K 201     V   152
V 202     K   153
L 203     Y   154
V 204     V   155
L 205     E   156
D 206     C   157
A 207     S   158
D 208     A   159
L 209     L   160
N 210     T   161
Q 219     Q   162
R 220     K   163
S 221     G   164
E 222     L   165
S 223     K   166
S 224     N   167
I 225     V   168
F 226     F   169
D 227     D   170
A 228     E   171
I 229     A   172
S 230     I   173
S 231     L   174
N 232     A   175
Q 233     A   176
Q 234     L   177
P 235     E   178
S 236     P   179
P 237     P   180
S 241     E   181
P 242     P   182
S 243     K   183
K 244     K   184
R 245     S   185
Q 246     R   186
R 247     R   187
V 248     C   188
A 249     V   189
R 250     L   190
TER
END

