
PFRMAT AL
TARGET T0117
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1qhi_A
G   17 M 46
T   18 P 47
Q   19 T 48
P   20 L 49
F   21 L 50
T   22 R 51
V   23 V 52
L   24 Y 53
I   25 I 54
E   26 D 55
G   27 G 56
N   28 P 57
I   29 H 58
G   30 G 59
S   31 M 60
G   32 G 61
K   33 K 62
T   34 T 63
T   35 T 64
Y   36 T 65
L   37 T 66
Y   43 Q 67
K   44 L 68
N   45 L 69
D   46 D 77
I   47 I 78
C   48 V 79
L   49 Y 80
L   50 V 81
T   51 P 82
E   52 E 83
P   53 P 84
V   54 M 85
E   55 T 86
K   56 Y 87
W   57 W 88
R   58 R 89
N   59 V 90
V   60 L 91
N   61 G 92
G   62 A 93
V   63 S 94
N   64 E 95
L   65 T 96
L   66 I 97
E   67 A 98
L   68 N 99
M   69 I 100
Y   70 Y 101
K   71 G 115
D   72 D 116
P   73 A 117
K   74 A 118
K   75 V 119
W   76 V 120
A   77 M 121
M   78 T 122
P   79 S 123
F   80 A 124
Q   81 Q 125
S   82 I 126
Y   83 T 127
V   84 M 128
T   85 G 129
L   86 M 130
T   87 P 131
M   88 Y 132
L   89 A 133
Q   90 V 134
S   91 T 135
H   92 G 144
T   93 G 145
A   94 E 146
P   95 A 147
T   96 P 154
N   97 P 155
K   98 A 156
K   99 L 157
L  100 T 158
K  101 L 159
I  102 I 160
M  103 F 161
E  104 D 162
R  105 R 163
S  106 H 164
I  107 P 165
F  108 I 166
S  109 A 167
A  110 A 168
R  111 L 169
Y  112 L 170
C  113 C 171
F  114 Y 172
V  115 P 173
E  116 A 174
N  117 A 175
M  118 R 176
R  119 Y 177
R  120 L 178
N  121 M 179
G  122 G 180
S  123 S 181
L  124 M 182
E  125 T 183
Q  126 P 184
G  127 Q 185
M  128 A 186
W  135 V 187
Y  136 L 188
K  137 A 189
F  138 F 190
I  139 V 191
E  140 A 192
E  141 L 193
S  142 I 194
I  143 P 195
H  144 P 196
V  145 L 198
Q  146 P 199
A  147 G 200
D  148 T 201
L  149 N 202
I  150 I 203
I  151 V 204
Y  152 L 205
L  153 G 206
R  154 A 207
T  155 L 208
S  156 P 209
P  157 E 210
E  158 D 211
V  159 R 212
A  160 H 213
Y  161 I 214
E  162 D 215
R  163 R 216
I  164 L 217
R  165 A 218
Q  166 K 219
R  167 R 220
A  168 Q 221
R  169 R 222
S  170 P 223
E  171 G 224
E  172 E 225
S  173 R 226
V  175 L 227
P  176 D 228
L  177 L 229
K  178 A 230
Y  179 M 231
L  180 L 232
Q  181 A 233
E  182 A 234
L  183 I 235
H  184 R 236
E  185 R 237
L  186 V 238
H  187 Y 239
E  188 E 257
D  189 D 258
W  190 W 259
L  191 E 296
I  192 L 297
H  193 L 298
Q  194 A 299
R  195 P 300
R  196 N 301
P  197 G 302
Q  198 D 303
S  199 L 304
C  200 Y 305
K  201 N 306
V  202 V 307
L  203 F 325
V  204 I 326
L  205 L 327
D  206 D 328
A  207 Y 329
D  208 D 330
L  209 Q 331
N  210 S 332
L  211 P 333
E  212 A 334
N  213 G 335
I  214 C 336
G  215 R 337
T  216 D 338
E  217 A 339
Y  218 L 340
Q  219 L 341
R  220 Q 342
S  221 L 343
E  222 T 344
S  223 S 345
S  224 T 360
I  225 I 361
F  226 C 362
D  227 D 363
A  228 L 364
I  229 A 365
S  230 R 366
S  231 T 367
N  232 F 368
Q  233 A 369
Q  234 R 370
P  235 E 371
S  236 M 372
P  237 G 373
V  238 E 374
TER
END

