
PFRMAT AL
TARGET T0117
AUTHOR 3995-5176-6362
METHOD Chandonia & Cohen, mostly unpublished.
METHOD Uses a combination of PSI-BLAST scoring matrix
METHOD and Pred2ary secondary structure prediction.
METHOD Pred2ary page is http://www.cmpharm.ucsf.edu/~jmc/pred2ary/
METHOD The potential is documented in the paper by
METHOD Schwartz et al which is referenced on
METHOD my research page: http://www.cmpharm.ucsf.edu/~jmc/research.html
MODEL 1
PARENT 1qf9_A
M 1 M 1
A 2 E 2
E 3 K 3
T 18 S 4
Q 19 K 5
P 20 P 6
F 21 N 7
T 22 V 8
V 23 V 9
L 24 F 10
I 25 V 11
E 26 L 12
G 27 G 13
N 28 G 14
I 29 P 15
G 30 G 16
S 31 S 17
G 32 G 18
K 33 K 19
T 34 G 20
T 35 T 21
Y 36 Q 22
L 37 C 23
N 38 A 24
H 39 N 25
F 40 I 26
E 41 V 27
K 42 R 28
Y 43 D 29
K 44 F 30
N 45 G 31
D 46 W 32
I 47 V 33
C 48 H 34
L 49 L 35
L 50 S 36
T 51 A 37
E 52 G 38
P 53 D 39
V 54 L 40
E 55 L 41
K 56 R 42
W 57 Q 43
R 58 E 44
N 59 Q 45
V 60 Q 46
N 61 S 47
G 62 G 48
V 63 S 49
N 64 K 50
L 65 D 51
E 67 G 52
L 68 E 53
M 69 M 54
Y 70 I 55
K 71 A 56
D 72 T 57
P 73 M 58
K 74 I 59
K 75 K 60
W 76 N 61
A 77 G 62
M 78 E 63
P 79 I 64
F 80 V 65
Q 81 P 66
S 82 S 67
Y 83 I 68
V 84 V 69
T 85 T 70
L 86 V 71
T 87 K 72
M 88 L 73
L 89 L 74
Q 90 K 75
S 91 N 76
H 92 A 77
T 93 I 78
A 94 D 79
P 95 A 80
T 96 N 81
N 97 Q 82
K 98 G 83
K 99 K 84
L 100 N 85
K 101 F 86
I 102 L 87
M 103 V 88
E 104 D 89
R 105 G 90
S 106 F 91
I 107 P 92
F 108 R 93
S 109 E 95
A 110 E 96
R 111 N 97
Y 112 N 98
C 113 N 99
F 114 S 100
V 115 W 101
E 116 E 102
N 117 E 103
M 118 N 104
R 119 M 105
R 120 K 106
N 121 D 107
G 122 F 108
S 123 V 109
L 124 D 110
E 125 T 111
Q 126 K 112
G 127 F 113
M 128 V 114
Y 129 L 115
Y 152 F 116
L 153 F 117
R 154 D 118
T 155 C 119
S 156 P 120
P 157 E 121
E 158 E 122
V 159 V 123
A 160 M 124
Y 161 T 125
E 162 Q 126
R 163 R 127
I 164 L 128
R 165 L 129
Q 166 K 130
R 167 R 131
A 168 G 132
R 169 E 133
S 170 S 134
E 171 G 136
E 172 R 137
S 173 S 138
C 174 D 139
V 175 D 140
P 176 N 141
L 177 I 142
K 178 E 143
Y 179 S 144
L 180 I 145
Q 181 K 146
E 182 K 147
L 183 R 148
H 184 F 149
E 185 N 150
L 186 T 151
H 187 F 152
E 188 Q 155
D 189 T 156
W 190 K 157
L 191 L 158
I 192 V 159
H 193 I 160
Q 194 D 161
R 195 H 162
R 196 Y 163
P 197 N 164
Q 198 K 165
L 205 F 166
D 206 D 167
A 207 A 174
D 208 N 175
L 209 R 176
N 210 D 177
L 211 V 178
E 212 N 179
N 213 E 180
I 214 V 181
G 215 Y 182
T 216 N 183
E 217 D 184
Y 218 V 185
Q 219 E 186
R 220 N 187
S 221 L 188
E 222 F 189
S 223 K 190
S 224 S 191
V 248 M 192
A 249 G 193
R 250 F 194
TER
END

