
PFRMAT AL
TARGET T0117
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=12.57
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: TmpK
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1tmk_A
T  18     G     3
Q  19     R     4
P  20     G     5
F  21     K     6
T  22     L     7
V  23     I     8
L  24     L     9
I  25     I    10
E  26     E    11
G  27     G    12
N  28     L    13
I  29     D    14
G  30     R    15
S  31     T    16
G  32     G    17
K  33     K    18
T  34     T    19
T  35     T    20
Y  36     Q    21
L  37     C    22
N  38     N    23
H  39     I    24
F  40     L    25
E  41     Y    26
K  42     K    27
Y  43     K    28
K  44     L    29
N  45     Q    30
D  46     P    31
T  51     N    32
E  52     C    33
P  53     K    34
V  54     L    35
E  55     L    36
K  56     K    37
W  57     F    38
R  58     R    41
N  59     S    42
V  60     T    43
N  61     R    44
G  62     I    45
V  63     G    46
N  64     G    47
L  65     L    48
L  66     I    49
E  67     N    50
L  68     E    51
M  69     Y    52
Y  70     L    53
K  71     T    54
D  72     D    55
P  73     D    56
W  76     L    60
A  77     S    61
M  78     D    62
P  79     Q    63
F  80     A    64
Q  81     I    65
S  82     H    66
Y  83     L    67
V  84     L    68
T  85     F    69
L  86     S    70
T  87     A    71
M  88     N    72
L  89     R    73
Q  90     W    74
S  91     E    75
H  92     I    76
T  93     V    77
A  94     D    78
T  96     K    79
N  97     I    80
K  98     K    81
K  99     K    82
L 100     D    83
K 101     L    84
I 102     L    85
M 103     E    86
E 104     G    87
R 105     K    88
S 106     N    89
I 107     I    90
F 108     V    91
S 109     M    92
A 110     D    93
R 111     R    94
Y 112     Y    95
C 113     V    96
F 114     Y    97
V 115     S    98
E 116     G    99
N 117     V   100
M 118     A   101
R 119     Y   102
R 120     S   103
N 121     A   104
S 123     A   105
L 124     K   106
E 125     G   107
Q 126     T   108
G 127     N   109
M 128     G   110
Y 129     M   111
N 130     D   112
T 131     L   113
L 132     D   114
E 133     W   115
E 134     C   116
W 135     L   117
Y 136     Q   118
K 137     P   119
F 138     D   120
I 139     V   121
I 143     G   122
H 144     L   123
V 145     L   124
Q 146     K   125
A 147     P   126
D 148     D   127
L 149     L   128
I 150     T   129
I 151     L   130
Y 152     F   131
L 153     L   132
R 154     S   133
T 155     T   134
S 156     Q   135
P 157     F   146
E 158     G   147
S 170     D   148
E 171     E   149
E 172     R   150
S 173     E   152
P 176     T   153
L 177     V   154
K 178     K   155
Y 179     F   156
L 180     Q   157
Q 181     E   158
E 182     K   159
L 183     V   160
H 184     K   161
E 185     Q   162
L 186     T   163
H 187     F   164
E 188     M   165
D 189     K   166
W 190     L   167
L 191     L   168
I 192     D   169
H 193     K   170
Q 194     E   171
R 195     I   172
R 196     R   173
P 197     K   174
Q 198     G   175
S 199     D   176
C 200     E   177
K 201     S   178
V 202     I   179
L 203     T   180
V 204     I   181
L 205     V   182
D 206     D   183
A 207     V   184
D 208     T   185
L 209     K   187
N 210     G   188
L 211     I   189
E 212     Q   190
N 213     E   191
I 214     V   192
G 215     E   193
T 216     A   194
E 217     L   195
Y 218     I   196
Q 219     W   197
R 220     Q   198
S 221     I   199
E 222     V   200
S 223     E   201
S 224     P   202
I 225     V   203
F 226     L   204
D 227     S   205
A 228     T   206
I 229     H   207
S 230     I   208
S 231     D   209
N 232     H   210
Q 233     D   211
Q 234     K   212
P 235     F   213
S 236     S   214
P 237     F   215
V 238     F   216
TER
END

