
PFRMAT AL
TARGET T0119
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1cne
H  107 G 11
H  108 R 12
F  109 I 13
E  110 H 14
G  111 C 15
T  112 R 16
L  113 L 17
A  114 V 18
R  115 A 19
V  116 K 20
E  117 K 21
N  118 E 22
L  119 L 23
S  120 S 24
D  121 R 25
S  122 D 26
T  123 V 27
I  124 R 28
T  125 L 29
F  126 F 30
D  127 R 31
I  128 F 32
Q  129 S 33
L  130 L 34
D  131 P 35
D  132 S 36
G  133 P 37
Q  134 D 38
P  135 Q 39
D  136 V 40
I  137 L 41
H  138 G 42
F  139 L 43
L  140 P 44
A  141 I 45
G  142 G 46
Q  143 K 47
Y  144 H 48
V  145 I 49
N  146 F 50
V  147 V 51
T  148 T 54
L  149 I 55
P  150 E 56
G  151 G 57
T  152 K 58
T  153 L 59
E  154 C 60
T  155 M 61
R  156 R 62
S  157 A 63
Y  158 Y 64
S  159 T 65
F  160 P 66
S  161 T 67
S  162 S 68
Q  163 M 69
P  164 V 70
G  165 D 71
N  166 E 72
R  167 G 74
L  168 H 75
T  169 F 76
G  170 D 77
F  171 L 78
V  172 L 79
V  173 V 80
R  174 K 81
N  175 V 82
V  176 Y 83
P  177 N 93
Q  178 G 94
G  179 G 95
K  180 L 96
M  181 M 97
S  182 T 98
E  183 Q 99
Y  184 Y 100
L  185 L 101
V  187 D 102
Q  188 S 103
A  189 L 104
K  190 P 105
A  191 V 106
G  192 G 107
D  193 S 108
K  194 Y 109
M  195 I 110
S  196 D 111
F  197 V 112
T  198 K 113
G  199 G 114
P  200 P 115
F  201 L 116
G  202 G 117
S  203 H 118
F  204 F 127
Y  205 V 128
L  206 I 129
R  207 N 130
D  208 G 131
V  209 K 132
K  210 Q 133
R  211 R 137
P  212 R 138
V  213 L 139
L  214 A 140
M  215 M 141
L  216 I 142
A  217 C 143
G  218 G 144
G  219 G 145
T  220 S 146
G  221 G 147
I  222 I 148
A  223 T 149
P  224 P 150
F  225 M 151
L  226 Y 152
S  227 Q 153
M  228 I 154
L  229 I 155
Q  230 Q 156
V  231 A 157
L  232 L 159
E  233 R 160
Q  234 D 161
K  235 Q 162
G  236 P 163
S  237 E 164
E  238 D 165
H  239 H 166
P  240 E 168
V  241 M 169
R  242 H 170
L  243 L 171
V  244 V 172
F  245 Y 173
G  246 A 174
V  247 N 175
T  248 R 176
Q  249 T 177
D  250 E 178
C  251 D 179
D  252 D 180
L  253 I 181
V  254 L 182
A  255 L 183
L  256 R 184
E  257 D 185
Q  258 E 186
L  259 L 187
D  260 D 188
A  261 R 189
L  262 W 190
Q  263 A 191
Q  264 A 192
K  265 E 193
L  266 Y 194
P  267 P 195
W  268 R 197
F  269 L 198
E  270 K 199
Y  271 V 200
R  272 W 201
T  273 Y 202
V  274 V 203
V  275 I 204
A  276 D 205
H  277 P 210
A  278 E 211
E  279 E 212
S  280 G 213
Q  281 W 214
H  282 K 215
E  283 Y 216
R  284 S 217
K  285 V 218
G  286 G 219
Y  287 F 220
V  288 V 221
T  289 T 222
G  290 E 223
H  291 A 224
I  292 V 225
E  293 L 226
Y  294 R 227
D  295 E 228
W  296 H 229
L  297 V 230
N  298 P 231
G  299 G 234
G  300 D 235
E  301 D 236
V  302 T 237
D  303 L 238
V  304 A 239
Y  305 L 240
L  306 A 241
C  307 S 242
G  308 G 243
P  309 P 244
V  310 P 245
P  311 P 246
M  312 M 247
V  313 I 248
E  314 Q 249
A  315 F 250
V  316 A 251
R  317 I 252
S  318 P 254
W  319 N 255
L  320 L 256
D  321 E 257
T  322 K 258
Q  323 M 259
G  324 K 260
I  325 Y 261
Q  326 D 262
P  327 M 263
A  328 A 264
N  329 N 265
K  334 S 266
F  335 F 267
S  336 V 268
A  337 V 269
N  338 F 270
TER
END

