
PFRMAT AL
TARGET T0119
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1ndh
S   98 P 3
S   99 A 4
E  100 I 5
V  101 T 6
C  102 L 7
K  103 E 8
T  104 N 9
K  105 P 10
I  106 D 11
H  107 I 12
H  108 K 13
F  109 Y 14
E  110 P 15
G  111 L 16
T  112 R 17
L  113 L 18
A  114 I 19
R  115 D 20
V  116 K 21
E  117 E 22
N  118 V 23
L  119 V 24
S  120 N 25
D  121 H 26
S  122 D 27
T  123 T 28
I  124 R 29
T  125 R 30
F  126 F 31
D  127 R 32
I  128 F 33
Q  129 A 34
L  130 L 35
D  131 P 36
D  132 S 37
G  133 P 38
Q  134 E 39
P  135 H 40
D  136 I 41
I  137 L 42
H  138 G 43
F  139 L 44
L  140 P 45
A  141 V 46
G  142 G 47
Q  143 Q 48
Y  144 H 49
V  145 I 50
N  146 Y 51
V  147 L 52
T  148 R 55
L  149 I 56
P  150 D 57
G  151 G 58
T  152 N 59
T  153 L 60
E  154 V 61
T  155 I 62
R  156 R 63
S  157 P 64
Y  158 Y 65
S  159 T 66
F  160 P 67
S  161 V 68
S  162 S 69
Q  163 S 70
P  164 D 71
G  165 D 72
N  166 D 73
R  167 G 75
L  168 F 76
T  169 V 77
G  170 D 78
F  171 L 79
V  172 V 80
V  173 I 81
R  174 K 82
N  175 V 83
V  176 Y 84
P  177 A 94
Q  178 G 95
G  179 G 96
K  180 K 97
M  181 M 98
S  182 S 99
E  183 Q 100
Y  184 Y 101
L  185 L 102
V  187 E 103
Q  188 S 104
A  189 M 105
K  190 K 106
A  191 I 107
G  192 G 108
D  193 D 109
K  194 T 110
M  195 I 111
S  196 E 112
F  197 F 113
T  198 R 114
G  199 G 115
P  200 P 116
F  201 K 125
G  202 G 126
S  203 K 127
F  204 F 128
Y  205 A 129
L  206 I 130
R  207 R 131
D  208 P 132
V  209 D 133
K  210 K 134
R  211 K 135
P  212 S 136
V  213 V 146
L  214 G 147
M  215 M 148
L  216 I 149
A  217 A 150
G  218 G 151
G  219 G 152
T  220 T 153
G  221 G 154
I  222 I 155
A  223 T 156
P  224 P 157
F  225 M 158
L  226 L 159
S  227 Q 160
M  228 V 161
L  229 I 162
Q  230 R 163
V  231 A 164
L  232 I 165
E  233 M 166
Q  234 K 167
K  235 D 168
G  236 P 169
S  237 D 170
E  238 D 171
H  239 H 172
P  240 T 173
V  241 V 174
R  242 H 176
L  243 L 177
V  244 L 178
F  245 F 179
G  246 A 180
V  247 N 181
T  248 Q 182
Q  249 T 183
D  250 E 184
C  251 K 185
D  252 D 186
L  253 I 187
V  254 L 188
A  255 L 189
L  256 R 190
E  257 P 191
Q  258 E 192
L  259 L 193
D  260 E 194
A  261 E 195
L  262 L 196
Q  263 R 197
Q  264 N 198
K  265 E 199
L  266 H 200
P  267 A 202
W  268 R 203
F  269 F 204
E  270 K 205
Y  271 L 206
R  272 W 207
T  273 Y 208
V  274 T 209
V  275 V 210
A  276 D 211
H  277 A 213
A  278 P 214
E  279 E 215
S  280 A 216
Q  281 W 217
H  282 D 218
E  283 Y 219
R  284 S 220
K  285 Q 221
G  286 G 222
Y  287 F 223
V  288 V 224
T  289 N 225
G  290 E 226
H  291 E 227
I  292 M 228
E  293 I 229
Y  294 R 230
D  295 D 231
W  296 H 232
L  297 L 233
N  298 P 234
G  299 P 235
G  300 P 236
E  301 E 239
V  302 P 240
D  303 L 241
V  304 V 242
Y  305 L 243
L  306 M 244
C  307 C 245
G  308 G 246
P  309 P 247
V  310 P 248
P  311 P 249
M  312 M 250
V  313 I 251
E  314 Q 252
A  315 A 254
V  316 C 255
R  317 L 256
S  318 P 257
W  319 N 258
L  320 L 259
D  321 E 260
T  322 R 261
Q  323 V 262
G  324 G 263
I  325 H 264
Q  326 P 265
P  327 K 266
A  328 E 267
N  329 R 268
K  334 C 269
F  335 F 270
S  336 A 271
A  337 F 272
TER
END

