
PFRMAT AL
TARGET T0119
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1cqx_A
M    1 M 1
S    2 L 2
N    3 T 3
H    4 Q 4
Q    5 K 5
F   10 T 6
E   11 K 7
D   12 D 8
G   13 I 9
V   14 V 10
T   15 K 11
R   16 A 12
F   17 T 13
I   18 A 14
C   19 P 15
I   20 V 16
A   21 E 19
Q   22 H 20
G   23 G 21
E   24 Y 22
T   25 D 23
L   26 I 24
S   27 I 25
D   28 Q 55
A   29 A 56
A   30 L 57
Y   31 A 58
R   32 R 59
Q   33 A 60
Q   34 N 67
I   35 I 68
N   36 E 69
I   37 D 70
P   38 P 71
M   39 N 72
D   40 S 73
C   41 L 74
R   42 M 75
E   43 H 85
G   44 A 86
E   45 S 87
C   46 L 88
G   47 G 89
T   48 V 90
C   49 E 93
R   50 Q 94
A   51 Y 95
F   52 P 96
C   53 I 97
E   54 V 98
Y   58 G 99
D   59 E 100
M   60 H 101
P   61 L 102
E   62 L 103
D   63 A 104
N   64 A 105
Y   65 I 106
I   66 L 110
E   67 G 111
D   68 N 112
A   69 A 113
L   70 A 114
T   71 T 115
P   72 D 116
E   73 D 117
E   74 I 118
A   75 I 119
Q   76 S 120
Q   77 A 121
G   78 A 125
Y   79 Y 126
V   80 G 127
L   81 N 128
A   82 L 129
C   83 A 130
Q   84 D 131
C   85 V 132
R   86 L 133
P   87 M 134
T   88 G 135
S   89 M 136
D   90 E 137
A   91 S 138
V   92 E 139
F   93 L 140
Q   94 Y 141
I   95 E 142
Q   96 R 143
A   97 S 144
S   98 A 145
S   99 E 146
E  100 Q 147
V  101 P 148
C  102 G 149
K  103 G 150
T  104 W 151
K  105 K 152
H  107 G 153
H  108 W 154
F  109 R 155
E  110 T 156
G  111 F 157
T  112 V 158
L  113 I 159
A  114 R 160
R  115 E 161
V  116 K 162
E  117 R 163
N  118 P 164
L  119 E 165
S  120 S 166
D  121 D 167
S  122 V 168
T  123 I 169
I  124 T 170
T  125 S 171
F  126 F 172
D  127 I 173
I  128 L 174
Q  129 E 175
L  130 P 176
D  131 A 177
D  132 D 178
G  133 G 179
Q  134 G 180
P  135 P 181
D  136 V 182
I  137 V 183
H  138 N 184
F  139 F 185
L  140 E 186
A  141 P 187
G  142 G 188
Q  143 Q 189
Y  144 Y 190
V  145 V 193
N  146 A 194
V  147 I 195
T  148 D 196
L  149 V 197
P  150 P 198
G  151 G 201
T  152 L 202
T  153 Q 203
E  154 Q 204
T  155 I 205
R  156 R 206
S  157 Q 207
Y  158 Y 208
S  159 S 209
F  160 L 210
S  161 S 211
S  162 D 212
Q  163 M 213
P  164 P 214
G  165 N 215
N  166 G 216
R  167 R 217
L  168 T 218
T  169 Y 219
G  170 R 220
F  171 I 221
V  172 S 222
V  173 V 223
R  174 K 224
N  175 R 225
V  176 E 226
P  177 P 232
Q  178 P 233
G  179 G 234
K  180 Y 235
M  181 V 236
S  182 S 237
E  183 N 238
Y  184 L 239
L  185 L 240
S  186 H 241
V  187 D 242
Q  188 H 243
A  189 V 244
K  190 N 245
A  191 V 246
G  192 G 247
D  193 D 248
K  194 Q 249
M  195 V 250
S  196 K 251
F  197 L 252
T  198 A 253
G  199 A 254
P  200 P 255
F  201 Y 256
G  202 G 257
S  203 S 258
F  204 F 259
Y  205 H 260
L  206 I 261
R  207 D 262
D  208 D 264
V  209 A 265
K  210 K 266
R  211 T 267
P  212 P 268
V  213 I 269
L  214 V 270
M  215 L 271
L  216 I 272
A  217 S 273
G  218 G 274
G  219 G 275
T  220 V 276
G  221 G 277
I  222 L 278
A  223 T 279
P  224 P 280
F  225 M 281
L  226 V 282
S  227 S 283
M  228 M 284
L  229 L 285
Q  230 K 286
V  231 V 287
L  232 A 288
E  233 L 289
K  235 Q 290
G  236 A 291
S  237 P 292
E  238 P 293
H  239 R 294
P  240 Q 295
V  241 V 296
R  242 V 297
L  243 F 298
V  244 V 299
F  245 H 300
G  246 G 301
V  247 A 302
T  248 R 303
Q  249 N 304
D  250 S 305
C  251 A 306
D  252 V 307
L  253 H 308
V  254 A 309
A  255 M 310
L  256 R 311
E  257 D 312
Q  258 R 313
L  259 L 314
D  260 R 315
A  261 E 316
L  262 A 317
Q  263 A 318
Q  264 K 319
K  265 T 320
L  266 Y 321
P  267 E 322
W  268 N 323
F  269 L 324
E  270 D 325
Y  271 L 326
R  272 F 327
T  273 V 328
V  274 F 329
V  275 Y 330
A  276 D 331
H  277 Q 332
A  278 P 333
E  279 Q 339
S  280 G 340
Q  281 R 341
H  282 D 342
E  283 Y 343
R  284 D 344
K  285 P 346
G  286 G 347
Y  287 L 348
V  288 V 349
T  289 D 350
G  290 V 351
H  291 K 352
I  292 Q 353
E  293 I 354
Y  294 E 355
D  295 K 356
W  296 S 357
L  297 I 358
N  298 L 359
G  299 L 360
G  300 P 361
E  301 D 362
V  302 A 363
D  303 D 364
V  304 Y 365
Y  305 Y 366
L  306 I 367
C  307 C 368
G  308 G 369
P  309 P 370
V  310 I 371
P  311 P 372
M  312 F 373
V  313 M 374
E  314 R 375
A  315 M 376
V  316 Q 377
R  317 H 378
S  318 D 379
W  319 A 380
L  320 L 381
D  321 K 382
T  322 N 383
Q  323 L 384
G  324 G 385
I  325 I 386
Q  326 H 387
P  327 E 388
A  328 A 389
N  329 R 390
F  330 I 391
L  331 H 392
F  332 Y 393
E  333 E 394
K  334 V 395
F  335 F 396
S  336 G 397
A  337 P 398
N  338 D 399
TER
END

