
PFRMAT AL
TARGET T0119
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1fdr
T  104 A 2
K  105 D 3
I  106 W 4
H  107 V 5
H  108 T 6
F  109 G 7
T  112 K 8
L  113 V 9
A  114 T 10
R  115 K 11
V  116 V 12
E  117 Q 13
N  118 N 14
L  119 W 15
S  120 T 16
D  121 D 17
S  122 A 18
T  123 L 19
I  124 F 20
T  125 S 21
F  126 L 22
D  127 T 23
I  128 V 24
Q  129 H 25
L  130 A 26
P  135 P 27
D  136 V 28
I  137 L 29
H  138 P 30
F  139 F 31
L  140 T 32
A  141 A 33
G  142 G 34
Q  143 Q 35
Y  144 F 36
V  145 T 37
N  146 K 38
V  147 L 39
T  148 G 40
L  149 L 41
P  150 E 42
G  151 I 43
T  152 R 47
E  154 V 48
T  155 Q 49
R  156 R 50
S  157 A 51
Y  158 Y 52
S  159 S 53
F  160 Y 54
S  161 V 55
S  162 N 56
Q  163 S 57
P  164 P 58
G  165 D 59
N  166 N 60
R  167 P 61
L  168 D 62
T  169 L 63
G  170 E 64
F  171 F 65
V  172 Y 66
V  173 L 67
R  174 V 68
N  175 T 69
V  176 V 70
P  177 P 71
Q  178 D 72
G  179 G 73
K  180 K 74
M  181 L 75
S  182 S 76
E  183 P 77
Y  184 R 78
L  185 L 79
S  186 A 80
Q  188 A 81
A  189 L 82
K  190 K 83
A  191 P 84
G  192 G 85
D  193 D 86
K  194 E 87
M  195 V 88
S  196 Q 89
F  197 V 90
T  198 V 91
G  199 S 92
P  200 E 93
F  201 A 94
G  202 A 95
S  203 G 96
F  204 F 97
Y  205 F 98
L  206 V 99
R  207 L 100
D  208 P 104
V  209 H 105
K  210 C 106
R  211 E 107
P  212 T 108
V  213 L 109
L  214 W 110
M  215 M 111
L  216 L 112
A  217 A 113
G  218 T 114
G  219 G 115
T  220 T 116
G  221 A 117
I  222 I 118
A  223 G 119
P  224 P 120
F  225 Y 121
L  226 L 122
S  227 S 123
M  228 I 124
L  229 L 125
Q  230 R 126
V  231 L 127
L  232 G 128
E  233 K 129
Q  234 D 130
K  235 L 131
G  236 D 132
S  237 R 133
E  238 F 134
H  239 K 135
P  240 N 136
V  241 L 137
R  242 V 138
L  243 L 139
V  244 V 140
F  245 H 141
G  246 A 142
V  247 A 143
T  248 R 144
Q  249 Y 145
D  250 A 146
C  251 A 147
D  252 D 148
L  253 L 149
V  254 S 150
A  255 Y 151
L  256 L 152
E  257 P 153
Q  258 L 154
L  259 M 155
D  260 Q 156
A  261 E 157
L  262 L 158
Q  263 E 159
Q  264 K 160
K  265 R 161
L  266 Y 162
P  267 E 163
W  268 G 164
F  269 K 165
E  270 L 166
Y  271 R 167
R  272 I 168
T  273 Q 169
V  274 T 170
V  275 V 171
A  276 V 172
H  277 S 173
A  278 R 174
E  279 E 175
S  280 T 176
Q  281 A 177
H  282 A 178
E  283 G 179
R  284 L 181
K  285 T 182
G  286 G 183
Y  287 R 184
V  288 I 185
T  289 P 186
G  290 A 187
H  291 L 188
I  292 I 189
E  293 I 198
Y  294 G 199
D  295 L 200
W  296 P 201
L  297 M 202
N  298 N 203
G  299 K 204
G  300 E 205
E  301 T 206
V  302 S 207
D  303 H 208
V  304 V 209
Y  305 M 210
L  306 L 211
C  307 C 212
G  308 G 213
P  309 N 214
V  310 P 215
P  311 Q 216
M  312 M 217
V  313 V 218
E  314 R 219
A  315 D 220
V  316 T 221
R  317 Q 222
S  318 Q 223
W  319 L 224
L  320 L 225
D  321 K 226
T  322 E 227
Q  323 L 235
G  324 R 236
I  325 R 237
Q  326 R 238
P  327 P 239
A  328 G 240
N  329 H 241
F  330 M 242
L  331 T 243
F  332 A 244
E  333 E 245
K  334 H 246
F  335 Y 247
S  336 W 248
TER
END

