
PFRMAT AL
TARGET T0119
AUTHOR 3995-5176-6362
METHOD Chandonia & Cohen, mostly unpublished.
METHOD Uses a combination of PSI-BLAST scoring matrix
METHOD and Pred2ary secondary structure prediction.
METHOD Pred2ary page is http://www.cmpharm.ucsf.edu/~jmc/pred2ary/
METHOD The potential is documented in the paper by
METHOD Schwartz et al which is referenced on
METHOD my research page: http://www.cmpharm.ucsf.edu/~jmc/research.html
MODEL 1
PARENT 1cqx_A
M 1 D 262
S 2 V 263
D 208 D 264
V 209 A 265
K 210 K 266
R 211 T 267
P 212 P 268
V 213 I 269
L 214 V 270
M 215 L 271
L 216 I 272
A 217 S 273
G 218 G 274
G 219 G 275
T 220 V 276
G 221 G 277
I 222 L 278
A 223 T 279
P 224 P 280
F 225 M 281
L 226 V 282
S 227 S 283
M 228 M 284
L 229 L 285
Q 230 K 286
V 231 V 287
L 232 A 288
E 233 L 289
Q 234 Q 290
K 235 A 291
G 236 P 292
E 238 P 293
H 239 R 294
P 240 Q 295
V 241 V 296
R 242 V 297
L 243 F 298
V 244 V 299
F 245 H 300
G 246 G 301
V 247 A 302
T 248 R 303
Q 249 N 304
D 250 S 305
C 251 A 306
D 252 V 307
L 253 H 308
V 254 A 309
A 255 M 310
L 256 R 311
E 257 D 312
Q 258 R 313
L 259 L 314
D 260 R 315
A 261 E 316
L 262 A 317
Q 263 A 318
Q 264 K 319
K 265 T 320
L 266 Y 321
P 267 E 322
W 268 N 323
F 269 L 324
E 270 D 325
Y 271 L 326
R 272 F 327
T 273 V 328
V 274 F 329
V 275 Y 330
A 276 D 331
H 277 Q 332
A 278 P 333
E 279 E 336
S 280 D 337
Q 281 V 338
H 282 Q 339
E 283 G 340
R 284 R 341
K 285 D 342
G 286 G 347
Y 287 L 348
V 288 V 349
T 289 D 350
G 290 V 351
H 291 K 352
I 292 Q 353
E 293 I 354
Y 294 E 355
D 295 K 356
W 296 S 357
L 297 I 358
N 298 L 359
G 299 L 360
G 300 P 361
E 301 D 362
V 302 A 363
D 303 D 364
V 304 Y 365
Y 305 Y 366
L 306 I 367
C 307 C 368
G 308 G 369
P 309 P 370
V 310 I 371
P 311 P 372
M 312 F 373
V 313 M 374
E 314 R 375
A 315 M 376
V 316 Q 377
R 317 H 378
S 318 D 379
W 319 A 380
L 320 L 381
D 321 K 382
T 322 N 383
Q 323 L 384
G 324 G 385
I 325 I 386
Q 326 H 387
P 327 E 388
A 328 A 389
N 329 R 390
F 330 I 391
L 331 H 392
F 332 Y 393
E 333 E 394
K 334 V 395
F 335 F 396
S 336 G 397
A 337 P 398
N 338 D 399
TER
END

