
PFRMAT AL
TARGET T0120
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1dg3_A
S   50 G 284
E   51 G 285
I   52 I 286
E   55 Q 287
A   56 V 288
D   57 N 289
D   58 G 290
M   59 P 291
A   60 R 292
M   61 L 293
E   62 E 294
K   65 S 295
Y   66 L 296
V   67 V 297
G   68 L 298
E   69 T 299
L   70 Y 300
R   71 V 301
K   72 N 302
A   73 A 303
L   74 I 304
L   75 S 305
S   76 S 306
G   77 G 307
A   78 D 308
G   79 L 309
P   80 P 310
A   81 C 311
K   90 M 312
E   91 E 313
S   92 N 314
C   93 A 315
Y   94 V 316
F   95 L 317
F   96 A 318
F   97 L 319
E   98 A 320
K   99 Q 321
N  100 I 322
L  101 E 323
K  102 N 324
D  103 S 325
V  104 A 326
S  105 A 327
F  106 V 328
R  107 Q 329
L  108 K 330
G  109 A 331
S  110 I 332
F  111 A 333
N  112 H 334
L  113 Y 335
E  114 E 336
K  115 K 342
V  116 V 343
E  117 Q 344
N  118 L 345
P  119 P 346
A  120 T 347
E  121 E 348
V  122 S 349
I  123 L 350
R  124 Q 351
E  125 E 352
L  126 L 353
I  127 L 354
C  128 D 355
Y  129 L 356
C  130 H 357
L  131 R 358
D  132 D 359
T  133 S 360
I  134 E 361
A  135 R 362
E  136 E 363
N  137 A 364
Q  138 I 365
A  139 E 366
K  140 D 375
N  141 V 376
E  142 D 377
H  143 H 378
L  144 L 379
Q  145 Q 381
K  146 K 382
E  147 E 383
N  148 L 384
E  149 A 385
R  150 A 386
D  154 Q 387
W  155 L 388
N  156 E 389
D  157 K 390
V  158 K 391
Q  159 R 392
G  160 D 393
R  161 D 394
F  162 F 395
E  163 C 396
K  164 K 397
C  165 Q 398
V  166 N 399
S  167 Q 400
A  168 E 401
K  169 S 404
E  170 D 405
A  171 R 406
L  172 C 407
E  173 S 408
T  174 G 409
D  175 L 410
L  176 L 411
Y  177 Q 412
K  178 V 413
R  179 I 414
F  180 F 415
I  181 S 416
L  182 P 417
V  183 L 418
L  184 E 419
N  185 E 420
E  186 E 421
K  187 V 422
K  188 K 423
T  189 A 424
K  190 G 425
I  191 I 426
R  192 Q 438
S  193 K 439
L  194 L 440
H  195 Q 441
N  196 D 442
K  197 L 443
L  198 K 444
L  199 K 445
N  200 K 446
A  201 Y 447
A  202 Y 448
Q  203 E 449
E  204 E 450
R  205 P 451
E  206 R 452
K  207 K 453
D  208 G 454
I  209 I 455
K  210 Q 456
Q  211 A 457
E  212 E 458
G  213 E 459
E  214 I 460
T  215 L 461
A  216 Q 462
I  217 T 463
C  218 Y 464
S  219 L 465
E  220 K 466
M  221 S 467
T  222 K 468
A  223 E 469
D  224 S 470
R  225 T 472
D  226 D 473
P  227 A 474
V  228 I 475
Y  229 L 476
D  230 Q 477
E  231 D 479
S  232 Q 480
T  233 T 481
D  234 L 482
E  235 T 483
E  236 E 484
S  237 K 485
E  238 E 486
N  239 K 487
Q  240 E 488
T  241 I 489
D  242 E 490
L  243 V 491
S  244 E 492
G  245 R 493
L  246 V 494
A  247 K 495
S  248 A 496
A  249 E 497
A  250 S 498
V  251 A 499
S  252 Q 500
K  253 A 501
D  254 S 502
D  255 A 503
S  256 K 504
I  257 M 505
I  258 L 506
S  259 H 507
S  260 E 508
L  261 M 509
D  262 Q 510
V  263 R 511
T  264 K 512
D  265 N 513
I  266 E 514
A  267 Q 515
P  268 M 517
S  269 E 518
R  270 Q 519
K  271 K 520
R  272 E 521
R  273 R 522
Q  274 S 523
R  275 Y 524
M  276 Q 525
Q  277 E 526
R  278 H 527
N  279 L 528
L  280 K 529
G  281 Q 530
T  282 L 531
E  283 T 532
P  284 E 533
K  285 K 534
M  286 M 535
A  287 E 536
P  288 N 537
Q  289 D 538
E  290 R 539
N  291 V 540
Q  292 Q 541
L  293 L 543
Q  294 K 544
E  295 E 545
K  296 Q 546
E  297 E 547
N  298 R 548
S  299 Q 555
R  300 E 556
P  301 Q 557
D  302 E 558
S  303 Q 559
S  304 L 560
L  305 L 561
P  306 K 562
E  307 E 563
T  308 G 564
S  309 F 565
K  310 Q 566
K  311 K 567
E  312 E 568
H  313 S 569
I  314 R 570
S  315 I 571
A  316 M 572
E  317 K 573
N  318 N 574
M  319 E 575
S  320 I 576
L  321 Q 577
E  322 D 578
T  323 L 579
L  324 Q 580
R  325 T 581
N  326 K 582
S  327 M 583
TER
END

