
PFRMAT AL
TARGET T0121
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=34.19
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1b0ua
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1b0u_A
A   2     N     5 
G   3     K     6 
V   4     L     7 
R   5     H     8 
L   6     V     9 
V   7     I    10 
D   8     D    11 
V   9     L    12 
W  10     H    13 
K  11     K    14 
V  12     R    15 
F  13     Y    16 
G  14     G    17 
E  15     G    18 
V  16     H    19 
T  17     E    20 
A  18     V    21 
V  19     L    22 
R  20     K    23 
E  21     G    24 
L  22     V    25 
S  23     S    26 
L  24     L    27 
E  25     Q    28 
V  26     A    29 
K  27     R    30 
D  28     A    31 
G  29     G    32 
E  30     D    33 
F  31     V    34 
M  32     I    35 
I  33     S    36 
L  34     I    37 
L  35     I    38 
G  36     G    39 
P  37     S    40 
S  38     S    41 
G  39     G    42 
C  40     S    43 
G  41     G    44 
K  42     K    45 
T  43     S    46 
T  44     T    47 
T  45     F    48 
L  46     L    49 
R  47     R    50 
M  48     C    51 
I  49     I    52 
A  50     N    53 
G  51     F    54 
L  52     L    55 
E  53     E    56 
E  54     K    57 
P  55     P    58 
S  56     S    59 
R  57     E    60 
G  58     G    61 
Q  59     A    62 
I  60     I    63 
Y  61     I    64 
I  62     V    65 
G  63     N    66 
D  64     G    67 
R  65     Q    68 
L  66     N    69 
V  67     I    70 
A  68     L    80 
D  69     K    81 
P  70     V    82 
E  71     A    83 
K  72     D    84 
G  73     K    85 
I  74     N    86 
F  75     Q    87 
V  76     L    88 
P  77     R    89 
P  78     L    90 
K  79     L    91 
D  80     R    92 
R  81     T    93 
D  82     R    94 
I  83     L    95 
A  84     T    96 
M  85     M    97 
V  86     V    98 
F  87     F    99 
Q  88     Q   100 
S  89     H   101 
Y  90     F   102 
A  91     N   103 
L  92     L   104 
Y  93     W   105 
P  94     S   106 
H  95     H   107 
M  96     M   108 
T  97     T   109 
V  98     V   110 
Y  99     L   111 
D 100     E   112 
N 101     N   113 
I 102     V   114 
A 103     E   116 
F 104     A   117 
P 105     P   118 
L 106     I   119 
K 107     Q   120 
L 108     V   121 
R 109     L   122 
K 110     G   123 
V 111     L   124 
P 112     S   125 
R 113     K   126 
Q 114     H   127 
E 115     D   128 
I 116     A   129 
D 117     R   130 
Q 118     E   131 
R 119     R   132 
V 120     A   133 
R 121     L   134 
E 122     K   135 
V 123     Y   136 
A 124     L   137 
E 125     A   138 
L 126     K   139 
L 127     V   140 
G 128     G   141 
L 129     I   142 
T 130     D   143 
E 131     E   144 
L 132     R   145 
L 133     A   146 
N 134     Q   147 
R 135     K   149 
K 136     Y   150 
P 137     P   151 
R 138     V   152 
E 139     H   153 
L 140     L   154 
S 141     S   155 
G 142     G   156 
G 143     G   157 
Q 144     Q   158 
R 145     Q   159 
Q 146     Q   160 
R 147     R   161 
V 148     V   162 
A 149     S   163 
L 150     I   164 
G 151     A   165 
R 152     R   166 
A 153     A   167 
I 154     L   168 
V 155     A   169 
R 156     M   170 
K 157     E   171 
P 158     P   172 
Q 159     D   173 
V 160     V   174 
F 161     L   175 
L 162     L   176 
M 163     F   177 
D 164     D   178 
E 165     E   179 
P 166     P   180 
L 167     T   181 
S 168     S   182 
N 169     A   183 
L 170     L   184 
D 171     D   185 
A 172     P   186 
K 173     E   187 
L 174     L   188 
R 175     V   189 
V 176     G   190 
R 177     E   191 
M 178     V   192 
R 179     L   193 
A 180     R   194 
E 181     I   195 
L 182     M   196 
K 183     Q   197 
K 184     Q   198 
L 185     L   199 
Q 186     A   200 
R 187     E   201 
Q 188     E   202 
G 190     G   203 
V 191     K   204 
T 192     T   205 
T 193     M   206 
I 194     V   207 
Y 195     V   208 
V 196     V   209 
T 197     T   210 
H 198     H   211 
D 199     E   212 
Q 200     M   213 
V 201     G   214 
E 202     F   215 
A 203     A   216 
M 204     R   217 
T 205     H   218 
M 206     V   219 
G 207     S   220 
D 208     S   221 
R 209     H   222 
I 210     V   223 
A 211     I   224 
V 212     F   225 
M 213     L   226 
N 214     H   227 
R 215     Q   228 
G 216     G   229 
V 217     K   230 
L 218     I   231 
Q 219     E   232 
Q 220     E   233 
V 221     E   234 
G 222     G   235 
S 223     D   236 
P 224     P   237 
D 225     E   238 
E 226     Q   239 
V 227     V   240 
Y 228     F   241 
D 229     G   242 
K 230     N   243 
P 231     P   244 
A 232     Q   245 
N 233     S   246 
K 358     P   247 
K 359     R   248 
I 360     L   249 
H 361     Q   250 
I 362     Q   251 
F 363     F   252 
D 364     L   253 
K 365     K   254 
T 366     G   255 
T 367     S   256 
G 368     L   257 
K 369     K   258 
A 370     K   259 
I 371     L   260 
F 372     E   261 
TER
END

