
PFRMAT  AL
TARGET  T0121
AUTHOR  8705-2233-5900
REMARK  
METHOD  The target protein sequence is aligned with the protein segments 
METHOD  from the selected protein list provided by Dr. Uwe Hobohm according
METHOD  to secondary structural propensities and hydrophobicities.  
METHOD  Secondary structures are derived from best alignment sequences 
METHOD  for each residue,
METHOD  and tertiary structure alignment is chosen according to the best 
METHOD  consistent with the secondary structures and the maximum alignment.
MODEL   2  
PARENT  2ay9_B
M    1    L   95
A    2    K   96
G    3    T   99
V    4    T  100
L    6    A  101
V    7    T  102
D    8    L  103
V    9    A  104
W   10    T  105
K   11    V  106
V   12    G  107
F   13    T  109
G   14    G  110
E   15    A  111
V   16    L  112
T   17    R  113
A   18    Q  114
V   19    A  115
R   20    L  116
E   21    E  117
S   23    L  118
L   24    A  119
E   25    R  120
V   26    M  121
K   27    A  122
D   28    P  124
G   29    L  126
E   30    R  129
L   35    V  133
G   36    V  135
P   37    D  137
S   38    P  138
G   39    T  139
C   40    W  140
G   41    P  141
K   42    N  142
T   43    H  143
T   44    V  144
T   45    S  145
L   46    I  146
I   49    M  147
A   50    N  148
L   52    F  149
E   53    M  150
E   54    G  151
P   55    L  152
S   56    P  154
R   57    V  155
G   58    Q  156
Q   59    T  157
I   60    Y  158
Y   61    R  159
I   62    Y  160
G   63    D  162
D   64    A  163
R   65    E  164
L   66    T  165
V   67    R  166
D   69    G  167
E   71    V  168
G   73    D  169
I   74    F  170
P   77    E  171
D   80    G  172
R   81    M  173
D   82    K  174
I   83    L  177
A   84    K  182
M   85    G  183
V   86    D  184
F   87    M  185
Q   88    H  189
M   96    G  190
A  103    C  191
F  104    C  192
L  106    H  193
K  107    N  194
R  109    P  195
K  110    T  196
V  111    G  197
P  112    A  198
R  113    N  199
Q  114    L  202
I  116    D  203
D  117    Q  204
Q  118    W  205
R  119    A  206
V  120    A  209
R  121    S  210
E  122    I  211
V  123    L  212
L  127    E  213
G  128    K  214
L  129    G  216
T  130    L  218
E  131    I  221
L  132    D  222
L  133    L  223
N  134    A  224
R  135    Y  225
K  136    Q  226
R  138    G  227
E  139    F  228
S  141    G  229
G  142    D  230
G  143    G  231
Q  144    L  233
Q  146    E  234
R  147    E  235
V  148    D  236
A  149    A  237
L  150    A  238
G  151    G  239
A  153    T  240
I  154    R  241
V  155    A  253
R  156    A  254
K  157    K  258
P  158    G  261
Q  159    I  262
V  160    Y  263
L  162    R  264
E  165    E  265
N  169    R  266
L  170    L  270
A  172    L  271
R  177    A  272
M  178    L  273
R  179    C  274
A  180    A  275
Q  186    D  276
R  187    Q  284
Q  188    G  285
Y  195    A  286
V  201    M  287
E  202    A  288
A  203    F  289
T  205    L  290
M  206    N  291
G  207    R  292
R  209    Q  293
I  210    T  294
A  211    Y  295
M  213    S  296
N  214    F  297
R  215    F  300
G  216    G  302
V  217    A  303
L  218    K  304
Q  219    I  305
Q  220    V  306
G  222    S  307
S  223    T  308
E  226    V  309
V  227    L  310
Y  228    T  311
D  229    T  312
P  231    P  313
N  233    E  314
T  234    A  317
F  235    W  319
V  236    M  320
A  237    A  321
G  238    E  322
F  239    L  323
I  240    E  324
G  241    A  325
S  242    V  326
P  244    R  327
M  245    S  328
N  246    G  329
F  247    M  330
D  249    L  331
A  250    E  335
I  251    G  339
V  252    E  340
T  253    L  341
E  254    D  343
D  255    L  344
G  256    R  349
V  258    F  350
D  259    G  351
E  262    F  352
F  263    V  353
R  264    A  354
L  265    E  355
K  266    H  356
L  267    G  358
L  268    M  359
P  269    F  360
E  273    S  361
G  276    R  362
E  277    L  363
L  278    G  364
G  279    A  365
G  282    T  366
R  283    P  367
E  284    E  368
V  285    Q  369
I  286    K  371
F  287    R  372
I  289    I  373
P  291    K  374
D  293    E  375
L  294    E  376
Y  295    F  377
D  296    M  381
A  297    V  382
F  299    G  383
A  300    R  386
R  301    I  387
R  303    N  388
V  304    I  389
P  305    L  392
G  306    D  394
E  307    N  395
N  308    T  396
L  309    I  397
V  310    P  398
R  311    L  400
A  312    A  401
V  313    R  402
V  314    A  403
E  315    I  404
I  316    I  405
V  317    E  406
E  318    V  407
N  319    G  408
L  320    V  409
TER      
END     



