
PFRMAT AL
TARGET T0122
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=37.26
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd2tysa
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 2tys_A
M   1     D    13 
F   2     R    14 
K   3     R    15 
D   4     E    16 
G   5     G    17 
S   6     A    18 
L   7     F    19 
I   8     V    20 
P   9     P    21 
Y  10     F    22 
L  11     V    23 
T  12     T    24 
A  13     L    25 
G  14     G    26 
D  15     D    27 
P  16     P    28 
D  17     G    29 
K  18     I    30 
Q  19     E    31 
S  20     Q    32 
T  21     S    33 
L  22     L    34 
N  23     K    35 
F  24     I    36 
L  25     I    37 
L  26     D    38 
A  27     T    39 
L  28     L    40 
D  29     I    41 
E  30     D    42 
Y  31     G    44 
A  32     A    45 
G  33     D    46 
A  34     A    47 
I  35     L    48 
E  36     E    49 
L  37     L    50 
G  38     G    51 
I  39     V    52 
P  40     P    53 
F  41     F    54 
S  42     S    55 
D  43     D    56 
P  44     P    57 
I  45     L    58 
A  46     A    59 
D  47     D    60 
G  48     G    61 
K  49     P    62 
T  50     T    63 
I  51     I    64 
Q  52     Q    65 
E  53     N    66 
S  54     A    67 
H  55     N    68 
Y  56     L    69 
R  57     R    70 
A  58     A    71 
L  59     F    72 
K  60     A    73 
N  61     A    74 
G  62     G    75 
F  63     V    76 
K  64     T    77 
L  65     P    78 
R  66     A    79 
E  67     Q    80 
A  68     C    81 
F  69     F    82 
W  70     E    83 
I  71     M    84 
V  72     L    85 
K  73     A    86 
E  74     L    87 
F  75     I    88 
R  76     R    89 
R  77     E    90 
H  78     H    92 
S  79     P    93 
S  80     T    94 
T  81     I    95 
P  82     P    96 
I  83     I    97 
V  84     G    98 
L  85     L    99 
M  86     L   100 
T  87     M   101 
Y  88     Y   102 
Y  89     A   103 
N  90     N   104 
P  91     L   105 
I  92     V   106 
Y  93     F   107 
R  94     N   108 
A  95     N   109 
G  96     G   110 
V  97     I   111 
R  98     D   112 
N  99     A   113 
F 100     F   114 
L 101     Y   115 
A 102     A   116 
E 103     R   117 
A 104     C   118 
K 105     E   119 
A 106     Q   120 
S 107     V   121 
G 108     G   122 
V 109     V   123 
D 110     D   124 
G 111     S   125 
I 112     V   126 
L 113     L   127 
V 114     V   128 
V 115     A   129 
D 116     D   130 
L 117     V   131 
P 118     P   132 
V 119     V   133 
F 120     E   134 
H 121     E   135 
A 122     S   136 
K 123     A   137 
E 124     P   138 
F 125     F   139 
T 126     R   140 
E 127     Q   141 
I 128     A   142 
A 129     A   143 
R 130     L   144 
E 131     R   145 
E 132     H   146 
G 133     N   147 
I 134     I   148 
K 135     A   149 
T 136     P   150 
V 137     I   151 
F 138     F   152 
L 139     I   153 
A 140     C   154 
A 141     P   155 
P 142     P   156 
N 143     N   157 
T 144     A   158 
P 145     D   159 
D 146     D   160 
E 147     D   161 
R 148     L   162 
L 149     L   163 
K 150     R   164 
V 151     Q   165 
I 152     V   166 
D 153     A   167 
D 154     S   168 
M 155     Y   169 
T 156     G   170 
T 157     R   171 
G 158     G   172 
F 159     Y   173 
V 160     T   174 
Y 161     Y   175 
L 162     L   176 
V 163     L   177 
S 164     S   178 
T 178     P   192 
A 179     L   193 
Y 180     H   194 
D 181     H   195 
L 182     L   196 
L 183     I   197 
R 184     E   198 
R 185     K   199 
A 186     L   200 
K 187     K   201 
R 188     E   202 
I 189     Y   203 
C 190     H   204 
R 191     A   205 
N 192     A   206 
K 193     P   207 
V 194     A   208 
A 195     L   209 
V 196     Q   210 
G 197     G   211 
F 198     F   212 
G 199     G   213 
V 200     I   214 
S 201     S   215 
K 202     S   216 
R 203     P   217 
E 204     E   218 
H 205     Q   219 
V 206     V   220 
V 207     S   221 
S 208     A   222 
L 209     A   223 
L 210     V   224 
K 211     R   225 
E 212     A   226 
G 213     G   227 
A 214     A   228 
N 215     A   229 
G 216     G   230 
V 217     A   231 
V 218     I   232 
V 219     S   233 
G 220     G   234 
S 221     S   235 
A 222     A   236 
L 223     I   237 
V 224     V   238 
K 225     K   239 
I 226     I   240 
I 227     I   241 
G 228     E   242 
E 229     K   243 
K 230     N   244 
G 231     L   245 
R 232     A   246 
E 233     S   247 
A 234     P   248 
T 235     K   249 
E 236     Q   250 
F 237     M   251 
L 238     L   252 
K 239     A   253 
K 240     E   254 
K 241     L   255 
V 242     R   256 
E 243     S   257 
E 244     F   258 
L 245     V   259 
L 246     S   260 
G 247     A   261 
I 248     M   262 
TER
END

