
PFRMAT AL
TARGET T0122
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=13.63
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1rpxa
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1rpx_A
M   1     K     5 
F   2     F     6 
K   3     S     7 
D   4     K     8 
G   5     S     9 
S   6     D    10 
L   7     I    11 
I   8     I    12 
P   9     V    13 
Y  10     S    14 
L  11     P    15 
T  12     S    16 
A  13     I    17 
G  14     L    18 
D  15     S    19 
P  16     A    20 
D  17     N    21 
K  18     F    22 
Q  19     S    23 
S  20     K    24 
T  21     L    25 
L  22     G    26 
N  23     E    27 
F  24     Q    28 
L  25     V    29 
L  26     K    30 
A  27     A    31 
L  28     I    32 
D  29     E    33 
E  30     A    35 
Y  31     G    36 
A  32     C    37 
G  33     D    38 
A  34     W    39 
I  35     I    40 
E  36     H    41 
L  37     V    42 
G  38     D    43 
I  39     V    44 
P  40     M    45 
D  47     D    46 
G  48     G    47 
K  49     R    48 
T  50     F    49 
I  51     V    50 
Q  52     P    51 
E  53     N    52 
S  54     I    53 
H  55     T    54 
Y  56     I    55 
R  57     G    56 
F  69     P    57 
W  70     L    58 
I  71     V    59 
V  72     V    60 
K  73     D    61 
E  74     S    62 
F  75     L    63 
R  76     R    64 
R  77     P    65 
H  78     I    66 
S  79     T    67 
S  80     D    68 
T  81     L    69 
P  82     P    70 
I  83     L    71 
V  84     D    72 
L  85     V    73 
M  86     H    74 
T  87     L    75 
Y  88     M    76 
Y  89     I    77 
A  95     V    78 
G  96     E    79 
V  97     P    80 
R  98     D    81 
N  99     Q    82 
F 100     R    83 
L 101     V    84 
A 102     P    85 
E 103     D    86 
A 104     F    87 
K 105     I    88 
A 106     K    89 
S 107     A    90 
G 108     G    91 
V 109     A    92 
D 110     D    93 
G 111     I    94 
I 112     V    95 
L 113     S    96 
V 114     V    97 
V 115     H    98 
D 116     Q   101 
L 117     S   102 
P 118     S   103 
V 119     T   104 
F 120     I   105 
H 121     H   106 
A 122     L   107 
K 123     H   108 
E 124     R   109 
F 125     T   110 
T 126     I   111 
E 127     N   112 
I 128     Q   113 
A 129     I   114 
R 130     K   115 
E 131     S   116 
E 132     L   117 
G 133     G   118 
I 134     A   119 
K 135     K   120 
T 136     A   121 
V 137     G   122 
F 138     V   123 
L 139     V   124 
A 140     L   125 
A 141     N   126 
P 142     P   127 
N 143     G   128 
T 144     T   129 
P 145     P   130 
D 146     L   131 
E 147     T   132 
R 148     A   133 
L 149     I   134 
K 150     E   135 
V 151     Y   136 
I 152     V   137 
D 153     L   138 
D 154     D   139 
M 155     A   140 
T 156     V   141 
T 157     D   142 
G 158     L   143 
F 159     V   144 
V 160     L   145 
Y 161     I   146 
L 162     M   147 
V 163     S   148 
S 164     V   149 
L 165     N   150 
Y 166     P   151 
G 167     G   152 
T 168     F   153 
T 169     G   154 
G 170     G   155 
A 171     Q   156 
R 172     S   157 
E 173     E   160 
E 174     S   161 
I 175     Q   162 
P 176     V   163 
K 177     K   164 
T 178     K   165 
A 179     I   166 
Y 180     S   167 
D 181     D   168 
L 182     L   169 
L 183     R   170 
R 184     K   171 
R 185     I   172 
A 186     C   173 
K 187     A   174 
R 188     E   175 
I 189     R   176 
C 190     G   177 
R 191     L   178 
N 192     N   179 
K 193     P   180 
V 194     W   181 
A 195     I   182 
V 196     E   183 
G 197     V   184 
F 198     D   185 
G 199     G   186 
V 200     G   187 
S 201     V   188 
K 202     G   189 
R 203     P   190 
E 204     K   191 
H 205     N   192 
V 206     A   193 
V 207     Y   194 
S 208     K   195 
L 209     V   196 
L 210     I   197 
K 211     E   198 
E 212     A   199 
G 213     G   200 
A 214     A   201 
N 215     N   202 
G 216     A   203 
V 217     L   204 
V 218     V   205 
V 219     A   206 
G 220     G   207 
S 221     S   208 
A 222     A   209 
L 223     V   210 
V 224     F   211 
K 225     G   212 
G 228     A   213 
E 229     P   214 
K 230     D   215 
G 231     Y   216 
R 232     A   217 
E 233     E   218 
A 234     A   219 
T 235     I   220 
E 236     K   221 
F 237     G   222 
L 238     I   223 
K 239     K   224 
K 240     T   225 
K 241     S   226 
V 242     K   227 
E 243     R   228 
E 244     P   229 
L 245     E   230 
TER
END

