
PFRMAT AL
TARGET T0122
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=10.31
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd2tpsa
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 2tps_A
M   1     M    22 
F   2     K    23 
K   3     E    24 
D   4     L    25 
G   5     L    26 
S   6     S    27 
L   7     V    28 
I   8     Y    29 
P   9     F    30 
Y  10     I    31 
L  11     M    32 
T  12     G    33 
A  13     S    34 
G  14     N    35 
D  15     N    36 
P  16     T    37 
D  17     K    38 
K  18     A    39 
Q  19     D    40 
S  20     P    41 
T  21     V    42 
L  22     T    43 
N  23     V    44 
F  24     V    45 
L  25     Q    46 
L  26     K    47 
A  27     A    48 
L  28     L    49 
D  29     K    50 
E  30     G    51 
Y  31     G    52 
A  32     A    53 
G  33     T    54 
A  34     L    55 
I  35     Y    56 
E  36     Q    57 
L  37     F    58 
G  38     R    59 
I  39     E    60 
P  40     K    61 
F  41     G    62 
S  42     G    63 
D  43     D    64 
P  44     A    65 
I  45     L    66 
N  61     T    67 
G  62     G    68 
F  63     E    69 
K  64     A    70 
L  65     R    71 
R  66     I    72 
E  67     K    73 
A  68     F    74 
F  69     A    75 
W  70     E    76 
I  71     K    77 
V  72     A    78 
K  73     Q    79 
E  74     A    80 
F  75     A    81 
R  76     C    82 
R  77     R    83 
H  78     E    84 
S  79     A    85 
S  80     G    86 
T  81     V    87 
P  82     P    88 
I  83     F    89 
V  84     I    90 
L  85     V    91 
M  86     N    92 
N  99     D    93 
F 100     D    94 
L 101     V    95 
A 102     E    96 
E 103     L    97 
A 104     A    98 
K 105     L    99 
A 106     N   100 
S 107     L   101 
G 108     K   102 
V 109     A   103 
D 110     D   104 
G 111     G   105 
I 112     I   106 
L 113     H   107 
V 114     I   108 
V 115     G   109 
D 116     Q   110 
P 118     E   111 
V 119     D   112 
F 120     A   113 
H 121     N   114 
A 122     A   115 
K 123     K   116 
E 124     E   117 
F 125     V   118 
T 126     R   119 
E 127     A   120 
I 128     A   121 
A 129     I   122 
R 130     G   123 
E 131     D   124 
E 132     M   125 
F 138     I   126 
L 139     L   127 
A 140     G   128 
A 141     V   129 
P 142     S   130 
N 143     A   131 
T 144     H   132 
P 145     T   133 
D 146     M   134 
E 147     S   135 
R 148     E   136 
L 149     V   137 
K 150     K   138 
V 151     Q   139 
I 152     A   140 
D 153     E   141 
D 154     E   142 
M 155     D   143 
T 156     G   144 
T 157     A   145 
G 158     D   146 
F 159     Y   147 
V 160     V   148 
Y 161     G   149 
L 162     L   150 
V 163     G   151 
S 164     P   152 
L 165     I   153 
Y 166     Y   154 
G 167     P   155 
T 168     T   156 
T 169     E   157 
G 170     T   158 
A 171     K   159 
R 172     K   160 
E 173     D   161 
E 174     T   162 
I 175     R   163 
P 176     A   164 
K 177     V   165 
T 178     Q   166 
A 179     G   167 
Y 180     V   168 
D 181     S   169 
L 182     L   170 
L 183     I   171 
R 184     E   172 
R 185     A   173 
A 186     V   174 
K 187     R   175 
R 188     R   176 
I 189     Q   177 
C 190     G   178 
R 191     I   179 
N 192     S   180 
K 193     I   181 
V 194     P   182 
A 195     I   183 
V 196     V   184 
G 197     G   185 
F 198     I   186 
G 199     G   187 
V 200     G   188 
S 201     I   189 
K 202     T   190 
R 203     I   191 
E 204     D   192 
H 205     N   193 
V 206     A   194 
V 207     A   195 
S 208     P   196 
L 209     V   197 
L 210     I   198 
K 211     Q   199 
E 212     A   200 
G 213     G   201 
A 214     A   202 
N 215     D   203 
G 216     G   204 
V 217     V   205 
V 218     S   206 
V 219     M   207 
G 220     I   208 
S 221     S   209 
A 222     A   210 
L 223     I   211 
V 224     S   212 
K 225     Q   213 
G 228     A   214 
E 229     E   215 
K 230     D   216 
G 231     P   217 
R 232     E   218 
E 233     S   219 
A 234     A   220 
T 235     A   221 
E 236     R   222 
F 237     K   223 
L 238     F   224 
K 239     R   225 
K 240     E   226 
K 241     E   227 
V 242     I   228 
E 243     Q   229 
E 244     T   230 
L 245     Y   231 
L 246     K   232 
G 247     T   233 
I 248     G   234 
TER
END

