
PFRMAT AL
TARGET T0122
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1dvj_A
M    1 M 9
F    2 D 10
K    3 V 11
D    4 M 12
G    5 N 13
S    6 R 14
L    7 L 15
I    8 I 16
L   11 L 17
T   12 A 18
A   13 M 19
G   14 D 20
D   15 L 21
P   16 M 22
D   17 N 23
K   18 R 24
Q   19 D 25
S   20 D 26
T   21 A 27
L   22 L 28
N   23 R 29
F   24 V 30
L   25 T 31
L   26 G 32
A   27 E 33
L   28 V 34
D   29 R 35
E   30 E 36
Y   31 Y 37
A   32 I 38
G   33 D 39
A   34 T 40
I   35 V 41
E   36 K 42
L   37 I 43
G   38 G 44
I   39 Y 45
P   40 P 46
F   41 L 47
S   42 V 48
D   43 L 49
R   66 S 50
E   67 E 51
A   68 G 52
F   69 M 53
W   70 D 54
I   71 I 55
V   72 I 56
K   73 A 57
E   74 E 58
F   75 F 59
R   76 R 60
R   77 K 61
H   78 R 62
S   79 F 63
S   80 G 64
T   81 C 65
P   82 R 66
I   83 I 67
V   84 I 68
L   85 A 69
M   86 D 70
T   87 F 71
Y   88 K 72
Y   89 V 73
N   90 A 74
P   91 D 75
I   92 I 76
Y   93 P 77
R   94 E 78
G   96 T 79
V   97 N 80
R   98 E 81
N   99 K 82
F  100 I 83
L  101 C 84
A  102 R 85
E  103 A 86
A  104 T 87
K  105 F 88
A  106 K 89
S  107 A 90
G  108 G 91
V  109 A 92
D  110 D 93
G  111 A 94
I  112 I 95
L  113 I 96
V  114 V 97
V  115 H 98
D  116 G 99
L  117 F 100
P  118 P 101
V  119 G 102
F  120 A 103
H  121 S 105
A  122 V 106
K  123 R 107
E  124 A 108
F  125 C 109
T  126 L 110
E  127 N 111
I  128 V 112
A  129 A 113
R  130 E 114
E  131 E 115
E  132 M 116
G  133 G 117
I  134 R 118
K  135 E 119
T  136 V 120
V  137 F 121
F  138 L 122
L  139 L 123
A  140 T 124
A  141 E 125
P  142 M 126
N  143 S 127
T  144 H 128
P  145 P 129
D  146 G 130
E  147 A 131
R  148 E 132
L  149 M 133
K  150 F 134
V  151 I 135
I  152 Q 136
D  153 G 137
D  154 A 138
T  156 A 139
T  157 D 140
G  158 E 141
F  159 I 142
V  160 A 143
Y  161 R 144
L  162 M 145
V  163 G 146
S  164 V 147
L  165 D 148
Y  166 L 149
G  167 G 150
T  168 V 151
T  169 K 152
G  170 N 153
A  171 Y 154
R  172 V 155
E  173 G 156
I  175 P 157
P  176 S 158
K  177 T 159
T  178 R 160
A  179 P 161
Y  180 E 162
D  181 R 163
L  182 L 164
L  183 S 165
R  184 R 166
R  185 L 167
A  186 R 168
K  187 E 169
R  188 I 170
I  189 I 171
C  190 G 172
R  191 Q 173
N  192 D 174
K  193 S 175
V  194 F 176
A  195 L 177
V  196 I 178
G  197 S 179
F  198 P 180
G  199 G 181
V  200 V 182
S  201 G 183
K  202 A 184
R  203 Q 185
E  204 G 186
H  205 G 187
V  206 D 188
V  207 P 189
S  208 G 190
L  209 E 191
L  210 T 192
K  211 L 193
E  212 R 194
G  213 F 195
A  214 A 196
N  215 D 197
G  216 A 198
V  217 I 199
V  218 I 200
V  219 V 201
G  220 G 202
S  221 R 203
A  222 S 204
L  223 I 205
V  224 E 220
K  225 S 221
I  226 I 222
I  227 K 223
G  228 D 224
E  229 L 225
K  230 L 226
G  231 I 227
R  232 P 228
E  233 E 229
A  234 D 230
T  235 P 231
E  236 A 232
F  237 A 233
L  238 N 234
K  239 K 235
K  240 K 238
K  241 E 239
V  242 A 240
E  243 E 241
E  244 A 244
L  245 A 245
L  246 T 246
G  247 A 247
TER
END

